Evidence map›Paper›PMID 32681282›Full record

ArticleJournal of assisted reproduction and genetics2020

Comprehensive analysis of soluble RNAs in human embryo culture media and blastocoel fluid.

Kirstine Kirkegaard, Yan Yan, Boe S Sørensen, Thorir Hardarson, Charles Hanson, Hans J Ingerslev, Ulla Breth Knudsen, Jørgen Kjems, Kersti Lundin, Aisling Ahlström

Open access · bronzeAbstract read
In one paragraph

Article in Journal of assisted reproduction and genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Kirstine KirkegaardDepartment of Clinical Biochemistry, Aarhus University Hospital, Palle Juul Jensens Boulevard, 8200, Aarhus N, Denmark. Kirstine.kirkegaard@clin.au.dk.ORCID https://orcid.org/0000-0001-8267-9042
Yan YanInterdisciplinary Nanoscience Center (iNANO) and Department of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark.
Boe S SørensenDepartment of Clinical Biochemistry, Aarhus University Hospital, Palle Juul Jensens Boulevard, 8200, Aarhus N, Denmark.
Thorir HardarsonLivio Fertilitetscentrum Gothenburg, Carlandersparken 24, 402 29, Gothenburg, Sweden.
Charles HansonUnit of Reproductive Medicine, Sahlgrenska University Hospital, 41345, Gothenburg, Sweden.
Hans J IngerslevFertility Unit and Centre for Preimplantation diagnosis, Aalborg University Hospital, Søndre Skovvej 3, 9000, Aalborg, Denmark.
Ulla Breth KnudsenFertility Clinic, Regional Hospital Horsens, Sundvej 30, 8700, Horsens, Denmark.
Jørgen KjemsInterdisciplinary Nanoscience Center (iNANO) and Department of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark.
Kersti LundinUnit of Reproductive Medicine, Sahlgrenska University Hospital, 41345, Gothenburg, Sweden.
Aisling AhlströmUnit of Reproductive Medicine, Sahlgrenska University Hospital, 41345, Gothenburg, Sweden.
Aarhus University · DKSahlgrenska University Hospital · SEAarhus University Hospital · DKAalborg University Hospital · DKFertilitetscentrum · SE

Funding

Sundhed og Sygdom, Det Frie Forskningsråd DFF - 4092-00222)
6 · The paper itself

Abstract

purposemiRNAs have been suggested as biomarkers of embryo viability; however, findings from preliminary studies are divergent. Furthermore, the presence of other types of small RNA molecules remains to be investigated. The purpose of this study was to perform a comprehensive analysis of small non-coding RNA levels in spent and unconditioned embryo culture media, along with miRNA levels in blastocoelic fluid samples from human embryos.

methodsmiRNAs in unconditioned culture medium from 3 different manufacturers, along with miRNA from day 5 conditioned culture medium, control medium, and corresponding blastocoel fluid from 10 human blastocysts were analyzed with array-based q-PCR analysis. Subsequently, deep sequencing of total and small RNA in day 5 spent culture medium from 5 human blastocysts and corresponding controls was performed.

resultsIn spite of using state-of-the-art sensitive detection methods, no miRNAs were found to be reliably present in the spent culture medium or the blastocoel fluid. C

conclusionsOur findings question the use of miRNAs as a reliable biomarker and highlight the need for a critical methodological approach in miRNA studies. Interestingly, tiRNA fragments appear to be overexpressed in conditioned IVF media samples and could potentially be a novel biomarker worthy of investigation.

Indexed as

BiomarkersBlastocystCulture Media, ConditionedEmbryo Culture TechniquesEmbryo ImplantationEmbryo TransferFemaleFertilization in VitroGene Expression Regulation, DevelopmentalHumansMicroRNAsRNA, Small UntranslatedBiomarkersCulture Media, ConditionedMicroRNAsRNA, Small UntranslatedARTBiomarkerCulture mediummiRNAtiRNA

Identifiers

PMID32681282
PMCPMC7492334
OpenAlexW3042843984

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.