Evidence map›Paper›PMID 32681099›Full record

ArticleScientific reports2020

Direct identification of bacterial and human proteins from infected wounds in living 3D skin models.

Jana Havlikova, Robin C May, Iain B Styles, Helen J Cooper

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Liquid Extraction Surface Analysis Mass Spectrometry of ESKAPE Pathogens.Journal of the American Society for Mass Spectrometry · 2021
    Article
  9. Review
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Jana HavlikovaEPSRC Centre for Doctoral Training in Physical Sciences for Health, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.
Robin C MaySchool of Biosciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.ORCID http://orcid.org/0000-0001-5364-1838
Iain B StylesEPSRC Centre for Doctoral Training in Physical Sciences for Health, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.
Helen J CooperSchool of Biosciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK. h.j.cooper@bham.ac.uk.ORCID http://orcid.org/0000-0003-4590-9384
University of Birmingham · GBEngineering and Physical Sciences Research Council · GBTuring Institute · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trauma is one of the leading causes of death in people under the age of 49 and complications due to wound infection are the primary cause of death in the first few days after injury. The ESKAPE pathogens are a group of bacteria that are a leading cause of hospital-acquired infections and a major concern in terms of antibiotic resistance. Here, we demonstrate a novel and highly accurate approach for the rapid identification of ESKAPE pathogens (Enterococcus faecium, Staphylococcus aureus, Klebsiella pneumoniae, Acinetobacter baumannii, Pseudomonas aeruginosa, and Enterobacter spp.) directly from infected wounds in 3D in vitro skin models. Wounded skin models were inoculated with bacteria and left to incubate. Bacterial proteins were identified within minutes, directly from the wound, by liquid extraction surface analysis mass spectrometry. This approach was able to distinguish closely related strains and, unlike genomic approaches, can be modified to provide dynamic information about pathogen behaviour at the wound site. In addition, since human skin proteins were also identified, this method offers the opportunity to analyse both host and pathogen biomarkers during wound infection in near real-time.

Indexed as

Models, BiologicalBacterial ProteinsHemolysin ProteinsHumansMass SpectrometrySkinStaphylococcus aureusWound InfectionBacterial Proteinsdelta hemolysin protein, Staphylococcus aureusHemolysin Proteins

Identifiers

PMID32681099
PMCPMC7368034
OpenAlexW3042285617

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.