Evidence map›Paper›PMID 32678150›Full record

ArticleScientific reports2020

Probing of carotenoid-tryptophan hydrogen bonding dynamics in the single-tryptophan photoactive Orange Carotenoid Protein.

Eugene G Maksimov, Elena A Protasova, Georgy V Tsoraev, Igor A Yaroshevich, Anton I Maydykovskiy, Evgeny A Shirshin, Timofey S Gostev, Alexander Jelzow, Marcus Moldenhauer, Yury B Slonimskiy and 2 more

Abstract read
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Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Eugene G MaksimovDepartment of Biophysics, Faculty of Biology, Lomonosov Moscow State University, 119991, Moscow, Russia. emaksimoff@yandex.ru.
Elena A ProtasovaDepartment of Biophysics, Faculty of Biology, Lomonosov Moscow State University, 119991, Moscow, Russia.
Georgy V TsoraevDepartment of Biophysics, Faculty of Biology, Lomonosov Moscow State University, 119991, Moscow, Russia.
Igor A YaroshevichDepartment of Biophysics, Faculty of Biology, Lomonosov Moscow State University, 119991, Moscow, Russia.
Anton I MaydykovskiyDepartment of Quantum Electronics, Faculty of Physics, M.V. Lomonosov Moscow State University, 119992, Moscow, Russia.
Evgeny A ShirshinDepartment of Quantum Electronics, Faculty of Physics, M.V. Lomonosov Moscow State University, 119992, Moscow, Russia.
Timofey S GostevDepartment of Biophysics, Faculty of Biology, Lomonosov Moscow State University, 119991, Moscow, Russia.
Alexander JelzowBecker & Hickl GmbH, Nunsdorfer Ring 7-9, 12277, Berlin, Germany.
Marcus MoldenhauerTechnical University of Berlin, Institute of Chemistry PC 14, Straße des des 17. Juni 135, 10623, Berlin, Germany.
Yury B SlonimskiyA.N. Bach Institute of Biochemistry, Federal Research Center of Biotechnology of the Russian Academy of Sciences, 119071, Moscow, Russia.
Nikolai N SluchankoDepartment of Biophysics, Faculty of Biology, Lomonosov Moscow State University, 119991, Moscow, Russia.
Thomas FriedrichTechnical University of Berlin, Institute of Chemistry PC 14, Straße des des 17. Juni 135, 10623, Berlin, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The photoactive Orange Carotenoid Protein (OCP) plays a key role in cyanobacterial photoprotection. In OCP, a single non-covalently bound keto-carotenoid molecule acts as a light intensity sensor, while the protein is responsible for forming molecular contacts with the light-harvesting antenna, the fluorescence of which is quenched by OCP. Activation of this physiological interaction requires signal transduction from the photoexcited carotenoid to the protein matrix. Recent works revealed an asynchrony between conformational transitions of the carotenoid and the protein. Intrinsic tryptophan (Trp) fluorescence has provided valuable information about the protein part of OCP during its photocycle. However, wild-type OCP contains five Trp residues, which makes extraction of site-specific information impossible. In this work, we overcame this problem by characterizing the photocycle of a fully photoactive OCP variant (OCP-3FH) with only the most critical tryptophan residue (Trp-288) in place. Trp-288 is of special interest because it forms a hydrogen bond to the carotenoid's keto-oxygen to keep OCP in its dark-adapted state. Using femtosecond pump-probe fluorescence spectroscopy we analyzed the photocycle of OCP-3FH and determined the formation rate of the very first intermediate suggesting that generation of the recently discovered S* state of the carotenoid in OCP precedes the breakage of the hydrogen bonds. Therefore, following Trp fluorescence of the unique photoactive OCP-3FH variant, we identified the rate of the H-bond breakage and provided novel insights into early events accompanying photoactivation of wild-type OCP.

Indexed as

Bacterial ProteinsCarotenoidsHydrogen BondingModels, MolecularMolecular ConformationSpectrometry, FluorescenceTryptophanBacterial ProteinsCarotenoidsorange carotenoid protein, SynechocystisTryptophan

Identifiers

PMID32678150
PMCPMC7366913

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.