Evidence map›Paper›PMID 32677771›Full record

ArticleJournal of cellular and molecular medicine2020

ST6Gal1 is up-regulated and associated with aberrant IgA1 glycosylation in IgA nephropathy: An integrated analysis of the transcriptome.

Youxia Liu, Fanghao Wang, Yaru Zhang, Junya Jia, Tiekun Yan

Open access · goldAbstract read
In one paragraph

Article in Journal of cellular and molecular medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Youxia LiuDepartment of Nephrology, Tianjin Medical University General Hospital, Tianjin, China.ORCID 0000-0002-9058-0218
Fanghao WangDepartment of Nephrology, Tianjin Medical University General Hospital, Tianjin, China.
Yaru ZhangDepartment of Nephrology, Hunan Second People's Hospital, Hunan, China.
Junya JiaDepartment of Nephrology, Tianjin Medical University General Hospital, Tianjin, China.
Tiekun YanDepartment of Nephrology, Tianjin Medical University General Hospital, Tianjin, China.
Tianjin Medical University General Hospital · CNSecond People Hospital of Hunan · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Galactose-deficient IgA1 (Gd-IgA1) plays a crucial role in the development of Immunoglobulin A nephropathy (IgAN), however, the underlying pathogenic mechanisms driving Gd-IgA1 production in B cells are not well understood. In this study, RNA-seq analysis identified 337 down-regulated and 405 up-regulated genes in B cells from 17 patients with IgAN and 6 healthy controls. Among them, ST6Gal1, which was associated with IgAN in a previous genome-wide association study (GWAS), was up-regulated in IgAN and significantly positive correlated with elevated Gd-IgA1. In addition, we identified increased plasma ST6Gal1 levels in 100 patients with IgAN, which were associated with higher levels of proteinuria, plasma IgA, Gd-IgA1 levels, greater degrees of systemic complement activation including C3a, Bb, C4d, MAC and a lower proportion classified as C2 grade (crescent proportion ≥25%). Interesting, in vitro, recombinant ST6Gal1 (rST6Gal1) exposure reduced the production of Gd-IgA1 in cultured peripheral blood mononuclear cells from IgAN patients. rST6Gal1 stimuli also increased expression of C1GALT1, which were well-known proportional to the decrease in galactose deficiency of IgA1. In conclusions, we identified increased plasma ST6Gal1 levels and the association of ST6Gal1 with disease severity of IgAN. Additionally, rST6Gal1 administration in vitro increased expression of C1GALT1 and reduced the production of Gd-IgA1.

Indexed as

AdultAntigens, CDbeta-D-Galactoside alpha 2-6-SialyltransferaseCase-Control StudiesDown-RegulationFemaleGalactoseGalactosyltransferasesGene Expression ProfilingGlomerulonephritis, IGAGlycosylationHumansImmunoglobulin ALeukocytes, MononuclearMaleRNA, MessengerAntigens, CDbeta-D-Galactoside alpha 2-6-SialyltransferaseC1GALT1 protein, humanGalactoseGalactosyltransferasesImmunoglobulin ARNA, MessengerSialyltransferasesST6GAL1 protein, humanB lymphocytegalactose-deficient IgA1IgA nephropathyRNA sequencingST6Gal1

Identifiers

PMID32677771
PMCPMC7521275
OpenAlexW3042403198

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.