Evidence map›Paper›PMID 32675111›Full record

ArticleRNA (New York, N.Y.)2020

Antagonism between splicing and microprocessor complex dictates the serum-induced processing of lnc-

Qinyu Sun, Qinyu Hao, Yo-Chuen Lin, You Jin Song, Sushant Bangru, Waqar Arif, Vidisha Tripathi, Yang Zhang, Jung-Hyun Cho, Susan M Freier and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 1 country.

Qinyu SunDepartment of Cell and Developmental Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
Qinyu HaoDepartment of Cell and Developmental Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
Yo-Chuen LinDepartment of Cell and Developmental Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
You Jin SongDepartment of Cell and Developmental Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
Sushant BangruDepartment of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
Waqar ArifDepartment of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
Vidisha TripathiDepartment of Cell and Developmental Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
Yang ZhangSchool of Computer Science, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, USA.
Jung-Hyun ChoDepartment of Biochemistry and Molecular Biology, Medical University of South Carolina, Charleston, South Carolina 29425, USA.
Susan M FreierIonis Pharmaceuticals Inc., Carlsbad, California 92008, USA.
Lisa M JenkinsLaboratory of Cell Biology, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, Maryland 20892, USA.
Jian MaSchool of Computer Science, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, USA.
Je-Hyun YoonDepartment of Biochemistry and Molecular Biology, Medical University of South Carolina, Charleston, South Carolina 29425, USA.
Auinash KalsotraDepartment of Biochemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
Ashish LalRegulatory RNAs and Cancer Section, Genetics Branch, Center for Cancer Research, National Cancer Institute, Bethesda, Maryland 20892, USA.
Supriya G PrasanthDepartment of Cell and Developmental Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
Kannanganattu V PrasanthDepartment of Cell and Developmental Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
University of Illinois Urbana-Champaign · USCarnegie Mellon University · USMedical University of South Carolina · USNational Cancer Institute · USIonis Pharmaceuticals (United States) · US

Funding

The role of SMAD1 and SATB2 in colon patterningP20GM130457 · NIGMS · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI Hailong Zhang · 2020 to 2026
$18.7M
TNF ALPHA AND RECOVERY FROM ALCOHOLIC LIVER INJURYR01AA010154 · NIAAA · JOHNS HOPKINS UNIVERSITY · PI ANNA MAE ELIZABETH DIEHL, Auinash Kalsotra · 1994 to 2026
$6.1M
Post-transcriptional mechanisms of gene regulation in cardiac cell growth and developmentR01HL126845 · NHLBI · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI KALSOTRA, AUINASH · 2015 to 2023
$3.5M
Tissue microenvironment (TIMe) training programT32EB019944 · NIBIB · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI BHARGAVA, ROHIT, GASKINS, REX · 2016 to 2025
$1.9M
Characterization of nuclear-retained RNA-mediated gene regulatory mechanismsR01GM132458 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI KANNANGANATTU, PRASANTH KUMAR VIJAYAN · 2020 to 2023
$1.4M
Regulation of genomic stability by ORCR01GM125196 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI PRASANTH, SUPRIYA G · 2018 to 2021
$1.3M
Monoalleleic autosomal spreading of a novel family of nucleolus-localized ncRNAsR21AG065748 · NIA · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI KANNANGANATTU, PRASANTH KUMAR VIJAYAN · 2020 to 2021
$423k
NHLBI NIH HHS R01 HL126845NIAAA NIH HHS R01 AA010154NIA NIH HHS R21 AG065748NIBIB NIH HHS T32 EB019944NIGMS NIH HHS P20 GM130457NIGMS NIH HHS R01 GM125196NIGMS NIH HHS R01 GM132458
6 · The paper itself

Abstract

Cellular quiescence and cell cycle reentry regulate vital biological processes such as cellular development and tissue homeostasis and are controlled by precise regulation of gene expression. The roles of long noncoding RNAs (lncRNAs) during these processes remain to be elucidated. By performing genome-wide transcriptome analyses, we identify differential expression of several hundreds of lncRNAs, including a significant number of the less-characterized class of microRNA-host-gene (

Indexed as

Cell CycleCell LineExome SequencingFibroblastsGene Expression ProfilingHEK293 CellsHumansLungNuclear Factor 45 ProteinNuclear Factor 90 ProteinsRNA, Long NoncodingRNA Processing, Post-TranscriptionalRNA SplicingSequence Analysis, RNASerine-Arginine Splicing FactorsSerumILF2 protein, humanILF3 protein, humanNuclear Factor 45 ProteinNuclear Factor 90 ProteinsRNA, Long NoncodingSerine-Arginine Splicing FactorsSRSF1 protein, humancell cyclelncRNAsmicroRNA-host genesquiescence

Identifiers

PMID32675111
PMCPMC7566567
OpenAlexW3043282384

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.