Evidence map›Paper›PMID 32674073›Full record

ArticleAging2020

The regulatory role of miR-107 in Coxsackie B3 virus replication.

Min Yao, Chi Xu, Hongxing Shen, Tingjun Liu, Xiuping Wang, Chen Shao, Shihe Shao

Open access · greenAbstract read
In one paragraph

Article in Aging, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.2field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Oncolytic viruses against cancer, promising or delusion?Medical oncology (Northwood, London, England) · 2023
    Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Min YaoSchool of Medical Science and Laboratory Medicine, Jiangsu University, Zhenjiang 212013, Jiangsu, China.
Chi XuMarshall International Center for Digestive Diseases, Shanghai East Hospital, Tongji University, Shanghai 200120, China.
Hongxing ShenSchool of Medical Science and Laboratory Medicine, Jiangsu University, Zhenjiang 212013, Jiangsu, China.
Tingjun LiuSchool of Medical Science and Laboratory Medicine, Jiangsu University, Zhenjiang 212013, Jiangsu, China.
Xiuping WangSchool of Medical Science and Laboratory Medicine, Jiangsu University, Zhenjiang 212013, Jiangsu, China.
Chen ShaoDepartment of Cardiology, Affiliated Hospital of Jiangsu University, Zhenjiang 212013, Jiangsu, China.
Shihe ShaoSchool of Medical Science and Laboratory Medicine, Jiangsu University, Zhenjiang 212013, Jiangsu, China.
Jiangsu University · CNShanghai East Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Coxsackie B3 virus (CVB3) is a member of small RNA viruses that belongs to the genus Enterovirus of the family Picornaviridae and CVB3 is the main pathogen of acute and chronic viral myocarditis. In this study RT-qPCR was used to determine the expression of miR-107 in CVB3-infected and uninfected HeLa cells. The experimental results show that the level of miR-107 began to rise at 4 h after the infection, and significantly boosted at 6 h. Based on the results of this experiment, we consider that miR-107 expression is related to CVB3 infection. In order to further clarify the effect of miR-107 in the process of CVB3 infection, we studied the effect of miR-107 upstream and downstream target genes on CVB3 replication. Levels of the target RNAs were detected by RT-qPCR after CVB3 infection, and the expression of CVB3 capsid protein VP1 by western blot analysis. Then the virus in the supernatant was quantitated via a viral plaque assay, reflecting the release of the virus. The experimental results showed that miRNA-107 expression is associated with CVB3 replication and proliferation, while KLF4 and BACE1 as the downstream of miR-107 weakened CVB3 replication. Overexpressions of KLF4 and BACE1 negatively regulated CVB3 replication, this effect on CVB3 was completely opposite to that of miR-107. Further experiments revealed that the upstream lncRNA004787, a new lncRNA that had not been reported, was located on chromosome 5, strand - from 37073250 to 37070908 (genome assembly: hg19). We sequenced and studied lncRNA004787 and found that it partially inhibited CVB3 replication. This prompted us to speculate that lncRNA004787 probably impacted the replication by other means. In conclusion, miR-107 interfered with CVB3 replication and release.

Indexed as

Amyloid Precursor Protein SecretasesAnimalsAspartic Acid EndopeptidasesChromosomes, Human, Pair 5EnterovirusHeLa CellsHumansKruppel-Like Factor 4Kruppel-Like Transcription FactorsMicroRNAsRNA, Long NoncodingRNA, ViralViral Plaque AssayVirus ReplicationAmyloid Precursor Protein SecretasesAspartic Acid EndopeptidasesBACE1 protein, humanKLF4 protein, humanKruppel-Like Factor 4Kruppel-Like Transcription FactorsMicroRNAsMIRN107 microRNA, humanRNA, Long NoncodingRNA, ViralCVB3lncRNA-004787MiR-107NFκBp-NFκB

Identifiers

PMID32674073
PMCPMC7425430
OpenAlexW3043458342

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.