Evidence map›Paper›PMID 32671212›Full record

ArticleScience advances2020

Horizontal gene transfer rate is not the primary determinant of observed antibiotic resistance frequencies in

Sonja Lehtinen, Claire Chewapreecha, John Lees, William P Hanage, Marc Lipsitch, Nicholas J Croucher, Stephen D Bentley, Paul Turner, Christophe Fraser, Rafał J Mostowy

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Current Methods for Recombination Detection in Bacteria.International journal of molecular sciences · 2022
    Review
  10. Article
  11. Review
  12. Article
  13. Invasive Pneumococcal Strain Distributions and Isolate Clusters Associated With Persons Experiencing Homelessness During 2018.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2021
    Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 6 countries.

Sonja LehtinenBig Data Institute, University of Oxford, Oxford, UK.ORCID 0000-0002-4236-828X
Claire ChewapreechaWellcome Sanger Institute, Hinxton, UK.ORCID 0000-0002-1313-4011
John LeesDepartment of Infectious Disease Epidemiology, School of Public Health, Imperial College London, London, UK.ORCID 0000-0001-5360-1254
William P HanageCenter for Communicable Disease Dynamics, Department of Epidemiology, Harvard T. H. Chan School of Public Health, Harvard University, Boston, MA, USA.ORCID 0000-0002-6319-7336
Marc LipsitchCenter for Communicable Disease Dynamics, Department of Epidemiology, Harvard T. H. Chan School of Public Health, Harvard University, Boston, MA, USA.ORCID 0000-0003-1504-9213
Nicholas J CroucherCenter for Communicable Disease Dynamics, Department of Epidemiology, Harvard T. H. Chan School of Public Health, Harvard University, Boston, MA, USA.ORCID 0000-0001-6303-8768
Stephen D BentleyWellcome Sanger Institute, Hinxton, UK.ORCID 0000-0001-8094-3751
Paul TurnerCambodia Oxford Medical Research Unit, Angkor Hospital for Children, Siem Reap, Cambodia.ORCID 0000-0002-1013-7815
Christophe FraserBig Data Institute, University of Oxford, Oxford, UK.ORCID 0000-0003-2399-9657
Rafał J MostowyBig Data Institute, University of Oxford, Oxford, UK.ORCID 0000-0002-4557-3748
Center for Disease Dynamics, Economics & Policy · USOpen Data Institute · GBWellcome Sanger Institute · GBAngkor Hospital for Children · KHImperial College London · GBJagiellonian University · PL

Funding

Understanding and controlling antibiotic resistanceU54GM088558 · NIGMS · HARVARD SCHOOL OF PUBLIC HEALTH · PI HANAGE, WILLIAM · 2009 to 2018
$26.4M
Epidemiology of Infectious Diseases and BiodefenseT32AI007535 · NIAID · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI GRAD, YONATAN H, MURRAY, MEGAN B · 1998 to 2025
$4.8M
Ecological and genetic contributions to the spread of resistance in pneumococcusR01AI106786 · NIAID · HARVARD SCHOOL OF PUBLIC HEALTH · PI HANAGE, WILLIAM · 2013 to 2017
$3.1M
Models for synthesising molecular, clinical and epidemiological data, and translaU01GM110721 · NIGMS · IMPERIAL COLLEGE OF SCIENCE, TECHNOLOGY AND MEDICINE · PI CAUCHEMEZ, SIMON, FERGUSON, NEIL MORRIS · 2014 to 2018
$1.9M
Medical Research Council MR/R015600/1NIAID NIH HHS R01 AI106786NIAID NIH HHS T32 AI007535NIGMS NIH HHS U01 GM110721NIGMS NIH HHS U54 GM088558Wellcome Trust
6 · The paper itself

Abstract

The extent to which evolution is constrained by the rate at which horizontal gene transfer (HGT) allows DNA to move between genetic lineages is an open question, which we address in the context of antibiotic resistance in

Identifiers

PMID32671212
PMCPMC7314567
OpenAlexW2949524569

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.