Evidence map›Paper›PMID 32669746›Full record

ArticleComputers & chemical engineering2020

MODELING INTER-KINGDOM REGULATION OF INFLAMMATORY SIGNALING IN HUMAN INTESTINAL EPITHELIAL CELLS.

Shreya Maiti, Genevieve Grivas, Kyungoh Choi, Wei Dai, Yufang Ding, Daniel Penarete Acosta, Juergen Hahn, Arul Jayaraman

Open access · greenAbstract read
In one paragraph

Article in Computers & chemical engineering, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 58% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Shreya MaitiArtie McFerrin Department of Chemical Engineering, Texas A&M University, College Station, TX.
Genevieve GrivasDepartment of Biomedical Engineering, Rensselaer Polytechnic Institute, Troy, NY.
Kyungoh ChoiArtie McFerrin Department of Chemical Engineering, Texas A&M University, College Station, TX.
Wei DaiDepartment of Chemical & Biological Engineering, Rensselaer Polytechnic Institute, Troy, NY.
Yufang DingArtie McFerrin Department of Chemical Engineering, Texas A&M University, College Station, TX.
Daniel Penarete AcostaDepartment of Biomedical Engineering, Texas A&M University, College Station, TX.
Juergen HahnDepartment of Biomedical Engineering, Rensselaer Polytechnic Institute, Troy, NY.
Arul JayaramanArtie McFerrin Department of Chemical Engineering, Texas A&M University, College Station, TX.
Texas A&M University · USRensselaer Polytechnic Institute · US

Funding

Modeling and Analysis of the Role of Microbiota Metabolites in T-Cell DifferentiationR01AI110642 · NIAID · TEXAS ENGINEERING EXPERIMENT STATION · PI ALANIZ, ROBERT CHRISTOPHER, HAHN, JUERGEN · 2015 to 2019
$2.0M
NIAID NIH HHS R01 AI110642
6 · The paper itself

Abstract

The human gastrointestinal (GI) tract is colonized by a highly diverse and complex microbial community (i.e., microbiota). The microbiota plays an important role in the development of the immune system, specifically mediating inflammatory responses, however the exact mechanisms are poorly understood. We have developed a mathematical model describing the effect of indole on host inflammatory signaling in HCT-8 human intestinal epithelial cells. In this model, indole modulates transcription factor nuclear factor κ B (NF-κB) and produces the chemokine interleukin-8 (IL-8) through the activation of the aryl hydrocarbon receptor (AhR). Phosphorylated NF-κB exhibits dose and time-dependent responses to indole concentrations and IL-8 production shows a significant down-regulation for 0.1 ng/mL TNF-α stimulation. The model shows agreeable simulation results with the experimental data for IL-8 secretion and normalized NF-κB values. Our results suggest that microbial metabolites such as indole can modulate inflammatory signaling in HTC-8 cells through receptor-mediated processes.

Indexed as

AhRIndoleInflammatory signalingMathematical modelNF-κBTNF-α

Identifiers

PMID32669746
PMCPMC7363026
OpenAlexW3033795932

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.