Evidence map›Paper›PMID 32668698›Full record

ArticleJournal of clinical medicine2020

Rapid Whole-Exome Sequencing as a Diagnostic Tool in a Neonatal/Pediatric Intensive Care Unit.

Robert Śmigiel, Mateusz Biela, Krzysztof Szmyd, Michal Błoch, Elżbieta Szmida, Paweł Skiba, Anna Walczak, Piotr Gasperowicz, Joanna Kosińska, Małgorzata Rydzanicz and 13 more

Open access · goldAbstract read
In one paragraph

Article in Journal of clinical medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed, 4 pooled it
8.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 4 syntheses or guidelines pooled it, 78 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 3 institutions in 1 country.

Robert ŚmigielDepartment of Pediatrics, Division Propaedeutic of Pediatrics and Rare Disorders, Wroclaw Medical University, 50-368 Wroclaw, Poland.
Mateusz BielaDepartment of Pediatrics, Division Propaedeutic of Pediatrics and Rare Disorders, Wroclaw Medical University, 50-368 Wroclaw, Poland.
Krzysztof SzmydLower Silesia Children's Hospice, 51-163 Wroclaw, Poland.
Michal BłochDepartment of Pediatrics, Division Propaedeutic of Pediatrics and Rare Disorders, Wroclaw Medical University, 50-368 Wroclaw, Poland.
Elżbieta SzmidaDepartment of Genetics, Wroclaw Medical University, 50-368 Wroclaw, Poland.
Paweł SkibaDepartment of Genetics, Wroclaw Medical University, 50-368 Wroclaw, Poland.
Anna WalczakDepartment of Medical Genetics, Warsaw Medical University, 02-106 Warsaw, Poland.
Piotr GasperowiczDepartment of Medical Genetics, Warsaw Medical University, 02-106 Warsaw, Poland.
Joanna KosińskaDepartment of Medical Genetics, Warsaw Medical University, 02-106 Warsaw, Poland.
Małgorzata RydzaniczDepartment of Medical Genetics, Warsaw Medical University, 02-106 Warsaw, Poland.
Piotr StawińskiDepartment of Medical Genetics, Warsaw Medical University, 02-106 Warsaw, Poland.
Anna BiernackaDepartment of Medical Genetics, Warsaw Medical University, 02-106 Warsaw, Poland.
Marzena ZielińskaDepartment of Anesthesiology and Intensive Care, Wroclaw Medical University, 50-556 Wroclaw, Poland.
Waldemar GołębiowskiDepartment of Anesthesiology and Intensive Care, Wroclaw Medical University, 50-556 Wroclaw, Poland.
Agnieszka JalowskaDepartment of Neonatology, Wroclaw Medical University, 50-556 Wroclaw, Poland.
Grażyna OhiaDepartment of Neonatology, Provincial Specialist Hospital, 51-124 Wroclaw, Poland.
Bożena GłowskaDepartment of Anesthesiology and Intensive Care Unit for Newborns and Children, Provincial Specialist Hospital, 51-149 Wroclaw, Poland.
Wojciech WalasPediatric and Neonatal Intensive Care Unit, University Hospital, 45-401 Opole, Poland.
Barbara Królak-OlejnikDepartment of Neonatology, Wroclaw Medical University, 50-556 Wroclaw, Poland.
Paweł KrajewskiDepartment of Forensic Medicine, Warsaw Medical University, 02-007 Warsaw, Poland.
Jolanta Sykut-CegielskaDepartment of Inborn Errors of Metabolism and Pediatrics, Institute of Mother and Child, 01-211 Warsaw, Poland.
Maria M SąsiadekDepartment of Genetics, Wroclaw Medical University, 50-368 Wroclaw, Poland.
Rafał PłoskiDepartment of Medical Genetics, Warsaw Medical University, 02-106 Warsaw, Poland.
Wroclaw Medical University · PLMedical University of Warsaw · PLUniversity of Opole · PL

Funding

Ministerstwo Nauki i Szkolnictwa Wyższego 016/RID/2018/19Narodowe Centrum Nauki OPUS.E160.18.006Uniwersytet Medyczny im. Piastów Slaskich we Wroclawiu SUB.E160.19.004
6 · The paper itself

Abstract

Genetic disorders are the leading cause of infant morbidity and mortality. Due to the large number of genetic diseases, molecular and phenotype heterogeneity and often severe course, these diseases remain undiagnosed. In infants with a suspected acute monogenic disease, rapid whole-exome sequencing (R-WES) can be successfully performed. R-WES (singletons) was performed in 18 unrelated infants with a severe and/or progressing disease with the suspicion of genetic origin hospitalized in an Intensive Care Unit (ICU). Blood samples were also collected from the parents. The results from the R-WES were available after 5-14 days. A conclusive genetic diagnosis was obtained in 13 children, corresponding to an overall diagnostic yield of 72.2%. For nine patients, R-WES was used as a first-tier test. Eight patients were diagnosed with inborn errors of metabolism, mainly mitochondrial diseases. In two patients, the disease was possibly caused by variants in genes which so far have not been associated with human disease (

Indexed as

first-tier testsgenetic disordersmitochondrial disordersNGSnovel diseasespediatric intensive care unitWES

Identifiers

PMID32668698
PMCPMC7408678
OpenAlexW3042544296

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.