Evidence map›Paper›PMID 32667910›Full record

ArticlePLoS biology2020

The pregnant myometrium is epigenetically activated at contractility-driving gene loci prior to the onset of labor in mice.

Virlana M Shchuka, Luis E Abatti, Huayun Hou, Nawrah Khader, Anna Dorogin, Michael D Wilson, Oksana Shynlova, Jennifer A Mitchell

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 33 citations in OpenAlex.

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  20. Next generation strategies for preventing preterm birth.Advanced drug delivery reviews · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Virlana M ShchukaDepartment of Cell and Systems Biology, University of Toronto, Toronto, Ontario, Canada.ORCID 0000-0003-1083-4888
Luis E AbattiDepartment of Cell and Systems Biology, University of Toronto, Toronto, Ontario, Canada.ORCID 0000-0003-1051-7997
Huayun HouDepartment of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.
Nawrah KhaderDepartment of Cell and Systems Biology, University of Toronto, Toronto, Ontario, Canada.ORCID 0000-0001-9475-6316
Anna DoroginLunenfeld Tanenbaum Research Institute, Sinai Health System, Toronto, Ontario, Canada.
Michael D WilsonDepartment of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.ORCID 0000-0002-4015-3066
Oksana ShynlovaLunenfeld Tanenbaum Research Institute, Sinai Health System, Toronto, Ontario, Canada.
Jennifer A MitchellDepartment of Cell and Systems Biology, University of Toronto, Toronto, Ontario, Canada.ORCID 0000-0002-7147-4604
University of Toronto · CALunenfeld-Tanenbaum Research Institute · CA

Funding

CIHR FRN 153198
6 · The paper itself

Abstract

During gestation, uterine smooth muscle cells transition from a state of quiescence to one of contractility, but the molecular mechanisms underlying this transition at a genomic level are not well-known. To better understand these events, we evaluated the epigenetic landscape of the mouse myometrium during the pregnant, laboring, and postpartum stages. We generated gestational time point-specific enrichment profiles for histone H3 acetylation on lysine residue 27 (H3K27ac), histone H3 trimethylation of lysine residue 4 (H3K4me3), and RNA polymerase II (RNAPII) occupancy by chromatin immunoprecipitation with massively parallel sequencing (ChIP-seq), as well as gene expression profiles by total RNA-sequencing (RNA-seq). Our findings reveal that 533 genes, including known contractility-driving genes (Gap junction alpha 1 [Gja1], FBJ osteosarcoma oncogene [Fos], Fos-like antigen 2 [Fosl2], Oxytocin receptor [Oxtr], and Prostaglandin G/H synthase 2 (Ptgs2), for example), are up-regulated at day 19 during active labor because of an increase in transcription at gene bodies. Labor-associated promoters and putative intergenic enhancers, however, are epigenetically activated as early as day 15, by which point the majority of genome-wide H3K27ac or H3K4me3 peaks present in term laboring tissue is already established. Despite this early exhibited histone signature, increased noncoding enhancer RNA (eRNA) production at putative intergenic enhancers and recruitment of RNAPII to the gene bodies of labor-associated loci were detected only during labor. Our findings indicate that epigenetic activation of the myometrial genome precedes active labor by at least 4 days in the mouse model, suggesting that the myometrium is poised for rapid activation of contraction-associated genes in order to exit the state of quiescence.

Indexed as

Epigenesis, GeneticGenetic LociAnimalsBase SequenceFemaleHistone CodeLabor, ObstetricMice, Inbred C57BLModels, GeneticMyometriumPregnancyPromoter Regions, GeneticRNARNA, MessengerRNA Polymerase IITranscription, GeneticRNARNA, MessengerRNA Polymerase II

Identifiers

PMID32667910
PMCPMC7384763
OpenAlexW3042279204

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.