Evidence map›Paper›PMID 32667784›Full record

ArticleJournal of chemical theory and computation2020

d-Retro Inverso Amylin and the Stability of Amylin Fibrils.

Preeti Pandey, Natalie Nguyen, Ulrich H E Hansmann

Abstract read
In one paragraph

Article in Journal of chemical theory and computation, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Modulation of AβJournal of chemical information and modeling · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. Small Peptides for Inhibiting Serum Amyloid A Aggregation.ACS medicinal chemistry letters · 2021
    Article
  6. Recent Applications of Retro-Inverso Peptides.International journal of molecular sciences · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Preeti PandeyDepartment of Chemistry & Biochemistry, University of Oklahoma, Norman, Oklahoma 73019, United States.
Natalie NguyenDepartment of Chemistry & Biochemistry, University of Oklahoma, Norman, Oklahoma 73019, United States.
Ulrich H E HansmannDepartment of Chemistry & Biochemistry, University of Oklahoma, Norman, Oklahoma 73019, United States.ORCID http://orcid.org/0000-0002-0700-4835

Funding

Efficient and Accurate Force Fields for Computer-Aided Drug DesignR01GM120578 · NIGMS · UNIVERSITY OF ARKANSAS AT FAYETTEVILLE · PI Feng Wang · 2017 to 2026
$1.9M
Structural Transitions in Proteins and Protein AssembliesR01GM120634 · NIGMS · UNIVERSITY OF OKLAHOMA · PI HANSMANN, ULRICH H.E. · 2017 to 2020
$1.2M
NIGMS NIH HHS R01 GM120578NIGMS NIH HHS R01 GM120634
6 · The paper itself

Abstract

Motivated by the role that amylin aggregates play in type-II diabetes, we compare the stability of regular amylin fibrils with the stability of fibrils where l-amino acid chains are replaced by d-retro inverso (DRI) amylin, that is, peptides where the sequence of amino acids is reversed, and at the same time, the l-amino acids are replaced by their mirror images. Our molecular dynamics simulations show that despite leading to only a marginal difference in the fibril structure and stability, aggregating DRI-amylin peptides have different patterns of contacts and hydrogen bonding. Because of these differences, DRI-amylin, when interacting with regular (l) amylin, alters the elongation process and lowers the stability of hybrid amylin fibrils. Our results not only suggest the potential use of DRI-amylin as an inhibitor of amylin fibril formation but also point to the possibility of using the insertion of DRI proteins in l-assemblies as a way to probe the role of certain kinds of hydrogen bonds in supramolecular assemblies or aggregates.

Indexed as

Molecular Dynamics SimulationHumansIslet Amyloid PolypeptideProtein StabilityIslet Amyloid Polypeptide

Identifiers

PMID32667784
PMCPMC7429257

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.