Evidence map›Paper›PMID 32665998›Full record

ArticleInvestigative and clinical urology2020

A novel urinary mRNA signature using the droplet digital polymerase chain reaction platform improves discrimination between prostate cancer and benign prostatic hyperplasia within the prostate-specific antigen gray zone.

Ho Won Kang, Hee Youn Lee, Young Joon Byun, Pildu Jeong, Jin Sun Yoon, Dong Ho Kim, Won Tae Kim, Yong-June Kim, Sang-Cheol Lee, Seok Joong Yun and 1 more

Open access · diamondAbstract readValidation Study
In one paragraph

Article in Investigative and clinical urology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Ho Won KangDepartment of Urology, Chungbuk National University Hospital, Chungbuk National University College of Medicine, Cheongju, Korea.ORCID 0000-0002-8164-4427
Hee Youn LeeDepartment of Urology, Chungbuk National University Hospital, Chungbuk National University College of Medicine, Cheongju, Korea.ORCID 0000-0001-8065-2807
Young Joon ByunDepartment of Urology, Chungbuk National University Hospital, Chungbuk National University College of Medicine, Cheongju, Korea.ORCID 0000-0003-0528-1502
Pildu JeongDepartment of Urology, Chungbuk National University Hospital, Chungbuk National University College of Medicine, Cheongju, Korea.ORCID 0000-0002-5602-5376
Jin Sun YoonMolecular Genetics, Bio-Medical Science Co., Ltd., Seoul, Korea.ORCID 0000-0002-8442-549X
Dong Ho KimMolecular Genetics, Bio-Medical Science Co., Ltd., Seoul, Korea.ORCID 0000-0002-0225-9847
Won Tae KimDepartment of Urology, Chungbuk National University Hospital, Chungbuk National University College of Medicine, Cheongju, Korea.ORCID 0000-0002-7482-4550
Yong-June KimDepartment of Urology, Chungbuk National University Hospital, Chungbuk National University College of Medicine, Cheongju, Korea.ORCID 0000-0001-7638-7174
Sang-Cheol LeeDepartment of Urology, Chungbuk National University Hospital, Chungbuk National University College of Medicine, Cheongju, Korea.ORCID 0000-0002-4163-2210
Seok Joong YunDepartment of Urology, Chungbuk National University Hospital, Chungbuk National University College of Medicine, Cheongju, Korea.ORCID 0000-0001-7737-4746
Wun-Jae KimDepartment of Urology, Chungbuk National University Hospital, Chungbuk National University College of Medicine, Cheongju, Korea.ORCID 0000-0002-8060-8926
Chungbuk National University Hospital · KRBio-Medical Science (South Korea) · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: The aim of this study was to identify a noninvasive urinary marker for prostate cancer (PCa) diagnosis and to validate the clinical performance of this novel urinary mRNA signature using the droplet digital polymerase chain reaction (ddPCR) approach. Materials and Methods: A gene expression microarray (HT-12, Illumina Inc., USA) was used to identify genes differentially expressed between 16 PCa and 8 benign prostatic hyperplasia (BPH) tissues; ddPCR (QX200; Bio-Rad Laboratories, USA) was carried out to quantify the expression of selected genes in urine. The urinary molecular PCa risk score (UMPCaRS) was calculated by using the sum of three upregulated genes as the numerator and the sum of three downregulated genes as the denominator. The diagnostic utility of the UMPCaRS was validated by using a screening set (10 PCa and 10 BPH samples) and a validation set (131 PCa and 105 BPH samples). Results: Three upregulated genes ( Conclusions: The data demonstrate that the UMPCaRS is useful for discriminating between PCa and BPH in the "PSA gray zone".

Indexed as

AgedAged, 80 and overBiomarkers, TumorDiagnosis, DifferentialHumansMaleMiddle AgedPolymerase Chain ReactionProstate-Specific AntigenProstatic HyperplasiaProstatic NeoplasmsRetrospective StudiesRNA, NeoplasmTranscriptomeBiomarkers, TumorProstate-Specific AntigenRNA, NeoplasmDiagnosisMicroarray analysisProstatic neoplasmsUrine

Identifiers

PMID32665998
PMCPMC7329636
OpenAlexW3038505198

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.