Evidence map›Paper›PMID 32665305›Full record

ArticleThe Plant cell2020

Nonsense-Mediated RNA Decay Factor UPF1 Is Critical for Posttranscriptional and Translational Gene Regulation in Arabidopsis.

Vivek K Raxwal, Craig G Simpson, Jiradet Gloggnitzer, Juan Carlos Entinze, Wenbin Guo, Runxuan Zhang, John W S Brown, Karel Riha

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 61 citations in OpenAlex.

  1. Genome-wide mapping of DCP2-dependent 5' cap footprints inNAR genomics and bioinformatics · 2026
    Article
  2. RNA regulation in plants.Science China. Life sciences · 2026
    Review
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  18. Functions and mechanisms of RNA helicases in plants.Journal of experimental botany · 2023
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Vivek K RaxwalCentral European Institute of Technology, Masaryk University, 625 00 Brno, Czech Republic.ORCID 0000-0002-5182-6377
Craig G SimpsonCell and Molecular Sciences, James Hutton Institute, Dundee DD2 5DA, United Kingdom.ORCID 0000-0002-1723-1492
Jiradet GloggnitzerGregor Mendel Institute, Austrian Academy of Sciences, 1030 Vienna, Austria.ORCID 0000-0002-0779-8778
Juan Carlos EntinzeDivision of Plant Sciences, University of Dundee at the James Hutton Institute, Dundee DD2 5DA, United Kingdom.ORCID 0000-0003-0106-2855
Wenbin GuoInformation and Computational Sciences, James Hutton Institute, Dundee DD2 5DA, United Kingdom.ORCID 0000-0002-1829-6044
Runxuan ZhangInformation and Computational Sciences, James Hutton Institute, Dundee DD2 5DA, United Kingdom.ORCID 0000-0001-7558-765X
John W S BrownCell and Molecular Sciences, James Hutton Institute, Dundee DD2 5DA, United Kingdom.ORCID 0000-0003-2979-779X
Karel RihaCentral European Institute of Technology, Masaryk University, 625 00 Brno, Czech Republic karel.riha@ceitec.muni.cz.ORCID 0000-0002-6124-0118
James Hutton Institute · GBCentral European Institute of Technology · CZGregor Mendel Institute of Molecular Plant Biology · AT

Funding

Biotechnology and Biological Sciences Research Council BB/P009751/1
6 · The paper itself

Abstract

Nonsense-mediated RNA decay (NMD) is an RNA control mechanism that has also been implicated in the broader regulation of gene expression. Nevertheless, a role for NMD in genome regulation has not yet been fully assessed, partially because NMD inactivation is lethal in many organisms. Here, we performed an in-depth comparative analysis of Arabidopsis (

Indexed as

Nonsense Mediated mRNA DecayAlternative SplicingArabidopsisArabidopsis ProteinsCarrier ProteinsGene Expression Regulation, PlantMutationProtein BiosynthesisProtein Processing, Post-TranslationalRNA HelicasesArabidopsis ProteinsCarrier ProteinsRNA HelicasesRPS6 protein, ArabidopsisSMG7 protein, ArabidopsisUPF1 protein, ArabidopsisUPF3 protein, Arabidopsis

Identifiers

PMID32665305
PMCPMC7474300
OpenAlexW3043758993

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.