Evidence map›Paper›PMID 32662291›Full record

ArticleApplied spectroscopy2021

Optimization of Sample Preparation Using Glass Slides for Spectral Pathology.

Lewis M Dowling, Paul Roach, Abigail V Rutter, Ibraheem Yousef, Srinivas Pillai, Deborah Latham, Daniel G van Pittius, Josep Sulé-Suso

Abstract read
In one paragraph

Article in Applied spectroscopy, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Lewis M DowlingSchool of Pharmacy and Bioengineering, Guy Hilton Research Centre, Keele University, Stoke-on-Trent, UK.
Paul RoachDepartment of Chemistry, Loughborough University, Leicestershire, UK.
Abigail V RutterSchool of Pharmacy and Bioengineering, Guy Hilton Research Centre, Keele University, Stoke-on-Trent, UK.
Ibraheem YousefALBA Synchrotron Light Source, Cerdanyola del Vallès, Barcelona, Catalonia.ORCID https://orcid.org/0000-0001-7818-8611
Srinivas PillaiHaematology Department, Cancer Centre, Royal Stoke University Hospital, University Hospitals of North Midlands, Stoke-on-Trent, UK.
Deborah LathamHistopathology Department, Royal Stoke University Hospital, University Hospitals of North Midlands, Stoke-on-Trent, UK.ORCID https://orcid.org/0000-0001-6286-2691
Daniel G van PittiusHistopathology Department, Royal Stoke University Hospital, University Hospitals of North Midlands, Stoke-on-Trent, UK.
Josep Sulé-SusoSchool of Pharmacy and Bioengineering, Guy Hilton Research Centre, Keele University, Stoke-on-Trent, UK.ORCID https://orcid.org/0000-0003-0598-737X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The clinical translation of Fourier transform infrared (FT-IR) microspectroscopy in pathology will require bringing this technique as close as possible to standard practice in pathology departments. An important step is sample preparation for both FT-IR microspectroscopy and pathology. This should entail minimal disruption of standard clinical practice while achieving good quality FT-IR spectral data. In fact, the recently described possibility of obtaining FT-IR spectra of cells placed on glass substrates brings FT-IR microspectroscopy closer to a clinical application. We have now furthered this work in order to identify two different types of lung cancer cells placed on glass coverslips. Two types of sample preparation which are widely used in pathology, cytospin and smear, have been used. Samples were fixed with either methanol, used in pathology, or formalin (4% paraformaldehyde) used widely in spectroscopy. Fixation with methanol (alcohol-based fixative) removed lipids from cells causing a decrease in intensity of the peaks at 2850 cm

Indexed as

Cell Line, TumorHistological TechniquesHumansLung NeoplasmsMicroscopySpecimen HandlingSpectroscopy, Fourier Transform Infraredcell fixationcytospinFourier transform infraredFT-IRglass coverslipslung cancermicrospectroscopysmear

Identifiers

PMID32662291
PMCPMC7961677

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.