Evidence map›Paper›PMID 32661769›Full record

ArticlePlanta2020

A new Piper nigrum cysteine proteinase inhibitor, PnCPI, with antifungal activity: molecular cloning, recombinant expression, functional analyses and molecular modeling.

Aline Medeiros Lima, Nicolle Louise Ferreira Barros, Ana Camila Oliveira Freitas, Liliane Souza Conceição Tavares, Carlos Priminho Pirovani, Andrei Santos Siqueira, Evonnildo Costa Gonçalves, Cláudia Regina Batista de Souza

Abstract read
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In one paragraph

Article in Planta, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Aline Medeiros LimaInstituto de Ciências Biológicas, Universidade Federal do Pará, Belém, PA, 66075-110, Brazil.
Nicolle Louise Ferreira BarrosInstituto de Ciências Biológicas, Universidade Federal do Pará, Belém, PA, 66075-110, Brazil.
Ana Camila Oliveira FreitasLaboratório de Proteômica, Centro de Biotecnologia e Genética, Universidade Estadual de Santa Cruz, Rodovia Jorge Amado, Km 16, Ilhéus, BA, 45662-900, Brazil.
Liliane Souza Conceição TavaresInstituto de Ciências Biológicas, Universidade Federal do Pará, Belém, PA, 66075-110, Brazil.
Carlos Priminho PirovaniLaboratório de Proteômica, Centro de Biotecnologia e Genética, Universidade Estadual de Santa Cruz, Rodovia Jorge Amado, Km 16, Ilhéus, BA, 45662-900, Brazil.
Andrei Santos SiqueiraInstituto de Ciências Biológicas, Universidade Federal do Pará, Belém, PA, 66075-110, Brazil.
Evonnildo Costa GonçalvesInstituto de Ciências Biológicas, Universidade Federal do Pará, Belém, PA, 66075-110, Brazil.
Cláudia Regina Batista de SouzaInstituto de Ciências Biológicas, Universidade Federal do Pará, Belém, PA, 66075-110, Brazil. bsouza@ufpa.br.ORCID http://orcid.org/0000-0002-4028-5835
Universidade Federal do Pará · BRUniversidade Estadual de Santa Cruz · BRUniversidade Federal Rural da Amazônia · BR

Funding

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) Finance Code 001Fundação Amazônia de Amparo a Estudos e Pesquisas (FAPESPA) ICAAF 124/2008
6 · The paper itself

Abstract

MAIN

conclusionA new Piper nigrum cysteine proteinase inhibitor, PnCPI, belonging to group I of phytocystatins, with inhibitory activity against papain and growth of Fusarium solani f. sp. piperis, was isolated and characterized. Previous studies (de Souza et al. 2011) have identified a partial cDNA sequence of putative cysteine proteinase inhibitor differentially expressed in roots of black pepper (P. nigrum L.) infected by F. solani f. sp. piperis. Here, we aimed to isolate the full-length cDNA and genomic sequences of the P. nigrum cysteine proteinase inhibitor gene, named PnCPI. Sequence analyses showed that the PnCPI gene encodes a deduced protein of 108 amino acid residues with a predicted molecular mass of 12.3 kDa and isoelectric point of 6.51. Besides the LARFAV-like sequence, common to all phytocystatins, PnCPI contains three conserved motifs of the superfamily cystatin: a glycine residue at the N-terminal region, the QxVxG reactive site more centrally positioned, and one tryptophan in the C-terminal region. PnCPI, belonging to group I of phytocystatins, showed high identity with cystatins isolated from several plant species. Sequence analyses also revealed no putative signal peptide at the N-terminal of PnCPI, as well as no introns within the genomic sequence corresponding to the PnCPI coding region. Molecular modeling showed the ability of PnCPI to interact with papain, while its inhibitory activity against this protease was confirmed after heterologous expression in Escherichia coli. The effects of heat treatments on the inhibitory activity of recombinant PnCPI, rPnCPI, were evaluated. In addition, rPnCPI exhibited in vitro activity against F. solani f. sp. piperis, revealing a new cystatin with the potential antifungal application. The identification of PnCPI as a functional cystatin able to inhibit the in vitro growth of F. solani f. sp. piperis indicates other factors contributing to in vivo susceptibility of black pepper to root rot disease.

Indexed as

Antifungal AgentsCloning, MolecularCystatinsCysteine Proteinase InhibitorsDNA, ComplementaryFusariumPapainPiper nigrumPlant DiseasesAntifungal AgentsCystatinsCysteine Proteinase InhibitorsDNA, ComplementaryPapainBlack pepperCysteine proteinase inhibitorFusarium solani f. sp. PiperisHeterologous expressionMolecular modelingRoot rot disease

Identifiers

PMID32661769
OpenAlexW3040718532

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.