ArticleScientific reports2020
Evolutionary dynamics of the chloroplast genome sequences of six Colobanthus species.
Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
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19 citing papers in PubMed, 32 citations in OpenAlex.
- Evolutionary dynamics of the chloroplast genome in Abutilon (Malvoideae, Malvaceae).BMC plant biology · 2026Article
- Comparative plastome analyses and phylogenetic insights ofFrontiers in plant science · 2026Article
- Plastome evidence repositionsFrontiers in plant science · 2026Article
- The complete chloroplast genome sequence ofMitochondrial DNA. Part B, Resources · 2026Article
- The Complete Chloroplast Genome ofGenes · 2025Article
- Chloroplast capture and range extension after hybridization in taro (Ecology and evolution · 2024Article
- The chloroplast genome of Chrozophora sabulosa Kar. & Kir. and its exploration in the evolutionary position uncertainty of genus Chrozophora.BMC genomics · 2024Article
- The complete Chloroplast genome of Stachys geobombycis and comparative analysis with related Stachys species.Scientific reports · 2024Article
- The complete chloroplast genome ofFrontiers in genetics · 2024Article
- Genomic exploration of Sesuvium sesuvioides: comparative study and phylogenetic analysis within the order Caryophyllales from Cholistan desert, Pakistan.BMC plant biology · 2023Article
- Complete chloroplast genomes of Cerastium alpinum, C. arcticum and C. nigrescens: genome structures, comparative and phylogenetic analysis.Scientific reports · 2023Article
- Characterization of the complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2023Article
- Novel molecular markers forFrontiers in genetics · 2023Article
- Chloroplast Genome Annotation Tools: Prolegomena to the Identification of Inverted Repeats.International journal of molecular sciences · 2022Article
- Article
- Towards the Well-Tempered Chloroplast DNA Sequences.Plants (Basel, Switzerland) · 2021Article
- Polymorphism in the Chloroplast ATP Synthase Beta-Subunit Is Associated with a Maternally Inherited Enhanced Cold Recovery in Cucumber.Plants (Basel, Switzerland) · 2021Article
- Comparative Analysis of the Chloroplast Genome for FourFrontiers in genetics · 2021Article
- Chloroplast Genome Evolution in Four Montane Zingiberaceae Taxa in China.Frontiers in plant science · 2021Article
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Authors and funding
9 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The complete plastome sequences of six species were sequenced to better understand the evolutionary relationships and mutation patterns in the chloroplast genome of the genus Colobanthus. The length of the chloroplast genome sequences of C. acicularis, C. affinis, C. lycopodioides, C. nivicola, C. pulvinatus and C. subulatus ranged from 151,050 to 151,462 bp. The quadripartite circular structure of these genome sequences has the same overall organization and gene content with 73 protein-coding genes, 30 tRNA genes, four rRNA genes and five conserved chloroplast open reading frames. A total of 153 repeat sequences were revealed. Forward repeats were dominant, whereas complementary repeats were found only in C. pulvinatus. The mononucleotide SSRs composed of A/T units were most common, and hexanucleotide SSRs were detected least often. Eleven highly variable regions which could be utilized as potential markers for phylogeny reconstruction, species identification or phylogeography were identified within Colobanthus chloroplast genomes. Seventy-three protein-coding genes were used in phylogenetic analyses. Reconstructed phylogeny was consistent with the systematic position of the studied species, and the representatives of the same genus were grouped in one clade. All studied Colobanthus species formed a single group and C. lycopodioides was least similar to the remaining species.
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