Evidence map›Paper›PMID 32660484›Full record

ArticleMalaria journal2020

Genetic polymorphism of Plasmodium falciparum circumsporozoite protein on Bioko Island, Equatorial Guinea and global comparative analysis.

Hui-Ying Huang, Xue-Yan Liang, Li-Yun Lin, Jiang-Tao Chen, Carlos Salas Ehapo, Urbano Monsuy Eyi, Jian Li, Ting-Ting Jiang, Yu-Zhong Zheng, Guang-Cai Zha and 7 more

Open access · goldAbstract read
In one paragraph

Article in Malaria journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 22 citations in OpenAlex.

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  9. Genetic polymorphism ofFrontiers in parasitology · 2025
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  12. Genetic polymorphism and evidence of signatures of selection in themedRxiv : the preprint server for health sciences · 2024
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  13. Frontiers in cellular and infection microbiology · 2024
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  14. Genetic variation of theFrontiers in parasitology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 2 countries.

Hui-Ying HuangSchool of Food Engineering and Biotechnology, Hanshan Normal University, Chaozhou, People's Republic of China.
Xue-Yan LiangSchool of Food Engineering and Biotechnology, Hanshan Normal University, Chaozhou, People's Republic of China.
Li-Yun LinSchool of Food Engineering and Biotechnology, Hanshan Normal University, Chaozhou, People's Republic of China.
Jiang-Tao ChenDepartment of Medical Laboratory, Huizhou Central Hospital, Huizhou, Guangdong Province, People's Republic of China.
Carlos Salas EhapoDepartment of Medical Laboratory, Malabo Regional Hospital, Malabo, Equatorial Guinea.
Urbano Monsuy EyiDepartment of Medical Laboratory, Malabo Regional Hospital, Malabo, Equatorial Guinea.
Jian LiDepartment of Human Parasitology, School of Basic Medical Sciences, Department of Infectious Diseases, Renmin Hospital, Hubei University of Medicine, Shiyan, Hubei Province, People's Republic of China.
Ting-Ting JiangDepartment of Human Parasitology, School of Basic Medical Sciences, Department of Infectious Diseases, Renmin Hospital, Hubei University of Medicine, Shiyan, Hubei Province, People's Republic of China.
Yu-Zhong ZhengSchool of Food Engineering and Biotechnology, Hanshan Normal University, Chaozhou, People's Republic of China.
Guang-Cai ZhaSchool of Food Engineering and Biotechnology, Hanshan Normal University, Chaozhou, People's Republic of China.
Dong-De XieThe Chinese Medical Aid Team to the Republic of Equatorial Guinea, Guangzhou, Guangdong Province, People's Republic of China.
Jin-Quan HeThe Chinese Medical Aid Team to the Republic of Equatorial Guinea, Guangzhou, Guangdong Province, People's Republic of China.
Wei-Zhong ChenDepartment of Medical Laboratory, Chaozhou People's Hospital Affiliated to Shantou University Medical College, Chaozhou, Guangdong Province, People's Republic of China.
Xiang-Zhi LiuDepartment of Medical Laboratory, Chaozhou People's Hospital Affiliated to Shantou University Medical College, Chaozhou, Guangdong Province, People's Republic of China.
Huan-Tong MoDepartment of Medical Laboratory, Chaozhou People's Hospital Affiliated to Shantou University Medical College, Chaozhou, Guangdong Province, People's Republic of China.
Xin-Yao ChenDepartment of Medical Laboratory, Chaozhou People's Hospital Affiliated to Shantou University Medical College, Chaozhou, Guangdong Province, People's Republic of China.
Min LinSchool of Food Engineering and Biotechnology, Hanshan Normal University, Chaozhou, People's Republic of China. konfutea@hotmail.com.ORCID http://orcid.org/0000-0002-0025-6167
Shantou University · CNHanshan Normal University · CNHubei University of Medicine · CNNational University of Equatorial Guinea · GQHuizhou Central People's Hospital · CN

Funding

Natural Science Foundation of Guangdong Province 2016A03031311
6 · The paper itself

Abstract

backgroundPlasmodium falciparum circumsporozoite protein (PfCSP) is a potential malaria vaccine candidate, but various polymorphisms of the pfcsp gene among global P. falciparum population become the major barrier to the effectiveness of vaccines. This study aimed to investigate the genetic polymorphisms and natural selection of pfcsp in Bioko and the comparison among global P. falciparum population.

methodsFrom January 2011 to December 2018, 148 blood samples were collected from P. falciparum infected Bioko patients and 96 monoclonal sequences of them were successfully acquired and analysed with 2200 global pfcsp sequences mined from MalariaGEN Pf3k Database and NCBI.

resultsIn Bioko, the N-terminus of pfcsp showed limited genetic variations and the numbers of repetitive sequences (NANP/NVDP) were mainly found as 40 (35%) and 41 (34%) in central region. Most polymorphic characters were found in Th2R/Th3R region, where natural selection (p > 0.05) and recombination occurred. The overall pattern of Bioko pfcsp gene had no obvious deviation from African mainland pfcsp (Fst = 0.00878, p < 0.05). The comparative analysis of Bioko and global pfcsp displayed the various mutation patterns and obvious geographic differentiation among populations from four continents (p < 0.05). The global pfcsp C-terminal sequences were clustered into 138 different haplotypes (H_1 to H_138). Only 3.35% of sequences matched 3D7 strain haplotype (H_1).

conclusionsThe genetic polymorphism phenomena of pfcsp were found universal in Bioko and global isolates and the majority mutations located at T cell epitopes. Global genetic polymorphism and geographical characteristics were recommended to be considered for future improvement of malaria vaccine design.

Indexed as

Polymorphism, GeneticEquatorial GuineaHaplotypesPlasmodium falciparumProtozoan ProteinsSelection, Geneticcircumsporozoite protein, ProtozoanProtozoan ProteinsBioko IslandCircumsporozoite proteinGenetic polymorphismMalariaPlasmodium falciparum

Identifiers

PMID32660484
PMCPMC7359586
OpenAlexW3040700360

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.