Evidence map›Paper›PMID 32658296›Full record

ArticleToxicological sciences : an official journal of the Society of Toxicology2020

The Gut Microbiome and Xenobiotics: Identifying Knowledge Gaps.

Vicki L Sutherland, Charlene A McQueen, Donna Mendrick, Donna Gulezian, Carl Cerniglia, Steven Foley, Sam Forry, Sangeeta Khare, Xue Liang, Jose E Manautou and 7 more

Abstract read
In one paragraph

Article in Toxicological sciences : an official journal of the Society of Toxicology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Accelerating Gut Microbiome Research with Robust Sample Collection.Research & reviews. Journal of microbiology and biotechnology · 2023
    Article
  6. Article
  7. Review
  8. Article
  9. Sources of Interindividual Variability.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Vicki L SutherlandNational Toxicology Program, National Institute of Environmental Health Sciences, Durham, North Carolina 27709.
Charlene A McQueenDepartment of Pharmacology and Toxicology, University of Arizona, Tucson, Arizona 85721.
Donna MendrickNational Center for Toxicological Research, US Food and Drug Administration, Silver Spring, MD 20993.
Donna GulezianTaconic Biosciences, Rensselaer, New York 12144.
Carl CernigliaDepartment of Pharmacokinetics, Pharmacodynamics and Drug Metabolism, Merck & Co., Inc., Kenilworth, New Jersey 07033.
Steven FoleyDepartment of Pharmacokinetics, Pharmacodynamics and Drug Metabolism, Merck & Co., Inc., Kenilworth, New Jersey 07033.
Sam ForryBiosystems and Biomaterials Division, National Institute of Standards and Technology, Gaithersburg, Maryland 20899.
Sangeeta KhareNational Center for Toxicological Research, US Food and Drug Administration, Silver Spring, MD 20993.
Xue LiangMerck Exploratory Science Center, Merck & Co., Inc., Cambridge, Massachusetts 02141.
Jose E ManautouDepartment of Pharmaceutics, University of Connecticut, Storrs, Connecticut 06269.
Donald TweedieDepartment of Pharmacokinetics, Pharmacodynamics and Drug Metabolism, Merck & Co., Inc., Kenilworth, New Jersey 07033.
Howard YoungLaboratory of Cancer Immunometabolism, Center for Cancer Research, NCI Frederick, Frederick, Maryland 21702.
Alexander V AlekseyenkoProgram for Human Microbiome Research, Biomedical Informatics Center, Department of Public Health Sciences, Department of Oral Health Sciences, Department of Healthcare Leadership & Management, Medical University of South Carolina, Charleston, South Carolina 29425.
Frank BurnsBioPrimate LLC, Newark, Delaware 19711.
Rod DietertDepartment of Microbiology and Immunology, Cornell University, Ithaca, New York 14850.
Alan WilsonDepartment of Drug Metabolism, Pharmacokinetics, Toxicology and Pathology, Lexicon Pharmaceuticals, Houston, Texas 77381.
Connie ChenHealth and Environmental Sciences Institute, Washington, District of Columbia 20005.

Funding

Toxicological Assessments for the Division of the National Toxicology ProgramZICES103316 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI WALKER, NIGEL J · 2020 to 2021
$18.5M
6 · The paper itself

Abstract

There is an increasing awareness that the gut microbiome plays a critical role in human health and disease, but mechanistic insights are often lacking. In June 2018, the Health and Environmental Sciences Institute (HESI) held a workshop, "The Gut Microbiome: Markers of Human Health, Drug Efficacy and Xenobiotic Toxicity" (https://hesiglobal.org/event/the-gut-microbiome-workshop) to identify data gaps in determining how gut microbiome alterations may affect human health. Speakers and stakeholders from academia, government, and industry addressed multiple topics including the current science on the gut microbiome, endogenous and exogenous metabolites, biomarkers, and model systems. The workshop presentations and breakout group discussions formed the basis for identifying data gaps and research needs. Two critical issues that emerged were defining the microbial composition and function related to health and developing standards for models, methods and analysis in order to increase the ability to compare and replicate studies. A series of key recommendations were formulated to focus efforts to further understand host-microbiome interactions and the consequences of exposure to xenobiotics as well as identifying biomarkers of microbiome-associated disease and toxicity.

Indexed as

BiomarkersGastrointestinal MicrobiomeHumansMicrobiotaXenobioticsBiomarkersXenobioticsanimal modelsbiomarkersbiotransformationenvironmentalguthealthmicrobiomexenobiotics

Identifiers

PMID32658296
PMCPMC7850111

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.