ArticleGenome biology and evolution2020
First Complete Genome Sequences of Janthinobacterium lividum EIF1 and EIF2 and Their Comparative Genome Analysis.
Article in Genome biology and evolution, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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14 citing papers in PubMed, 24 citations in OpenAlex.
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- Seasonal dynamics and core stability of the bacterial microbiome of a Drosophila suzukii wild population.Scientific reports · 2026Article
- Chitin degradation by the aquatic pigment-producing bacteria of Janthinobacterium spp. from stream flows and springs of Shulgan River basin and Shulgan-Tash Cave, Southern Urals.Biodegradation · 2025Article
- Large genomic, functional, and phenotypical diversity ofFEMS microbes · 2025Article
- Extracellular vesicles of Janthinobacterium lividum as violacein carriers in melanoma cell treatment.Applied microbiology and biotechnology · 2024Article
- Deciphering Interactions Within a 4-Strain Riverine Bacterial Community.Current microbiology · 2023Article
- Functional characterization of a novel violacein biosynthesis operon from Janthinobacterium sp. B9-8.Applied microbiology and biotechnology · 2022Article
- Into the Unknown: Microbial Communities in Caves, Their Role, and Potential Use.Microorganisms · 2022Review
- Metagenomic Insights into the Composition and Function of Microbes Associated with the Rootzone ofBiotech (Basel (Switzerland)) · 2022Article
- Genome Analysis of theCurrent issues in molecular biology · 2021Article
- Molecular signatures of Janthinobacterium lividum from Trinidad support high potential for crude oil metabolism.BMC microbiology · 2021Article
- Complete Genome Sequence ofMicrobiology resource announcements · 2021Article
- Complete Genome Sequence of Stenotrophomonas indicatrix DAIF1.Microbiology resource announcements · 2021Article
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Authors and funding
6 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
We present the first two complete genomes of the Janthinobacterium lividum species, namely strains EIF1 and EIF2, which both possess the ability to synthesize violacein. The violet pigment violacein is a secondary metabolite with antibacterial, antifungal, antiviral, and antitumoral properties. Both strains were isolated from environmental oligotrophic water ponds in Göttingen. The strains were phylogenetically classified by average nucleotide identity (ANI) analysis and showed a species assignment to J. lividum with 97.72% (EIF1) and 97.66% (EIF2) identity. These are the first complete genome sequences of strains belonging to the species J. lividum. The genome of strain EIF1 consists of one circular chromosome (6,373,589 bp) with a GC-content of 61.98%. The genome contains 5,551 coding sequences, 122 rRNAs, 93 tRNAs, and 1 tm-RNA. The genome of EIF2 comprises one circular chromosome (6,399,352 bp) with a GC-content of 61.63% and a circular plasmid p356839 (356,839 bp) with a GC-content of 57.21%. The chromosome encodes 5,691 coding sequences, 122 rRNAs, 93 tRNAs, and 1 tm-RNA and the plasmid harbors 245 coding sequences. In addition to the highly conserved chromosomally encoded violacein operon, the plasmid comprises a nonribosomal peptide synthetase cluster with similarity to xenoamicin, which is a bioactive compound effective against protozoan parasites.
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