Evidence map›Paper›PMID 32657755›Full record

ArticleeLife2020

Assigning mitochondrial localization of dual localized proteins using a yeast Bi-Genomic Mitochondrial-Split-GFP.

Gaétan Bader, Ludovic Enkler, Yuhei Araiso, Marine Hemmerle, Krystyna Binko, Emilia Baranowska, Johan-Owen De Craene, Julie Ruer-Laventie, Jean Pieters, Déborah Tribouillard-Tanvier and 5 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 43 citations in OpenAlex.

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  10. Review
  11. Mitochondrial proteome research: the road ahead.Nature reviews. Molecular cell biology · 2024
    Review
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  20. Subcellular Localization of Fad1p inLife (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 3 countries.

Gaétan Bader *Université de Strasbourg, CNRS UMR7156, Génétique Moléculaire, Génomique, Microbiologie, Strasbourg, France.
Ludovic Enkler *Université de Strasbourg, CNRS UMR7156, Génétique Moléculaire, Génomique, Microbiologie, Strasbourg, France.
Yuhei Araiso *Université de Strasbourg, CNRS UMR7156, Génétique Moléculaire, Génomique, Microbiologie, Strasbourg, France.
Marine Hemmerle *Université de Strasbourg, CNRS UMR7156, Génétique Moléculaire, Génomique, Microbiologie, Strasbourg, France.
Krystyna BinkoInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.
Emilia BaranowskaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.
Johan-Owen De CraeneUniversité de Strasbourg, CNRS UMR7156, Génétique Moléculaire, Génomique, Microbiologie, Strasbourg, France.
Julie Ruer-LaventieBiozentrum, University of Basel, Basel, Switzerland.
Jean PietersBiozentrum, University of Basel, Basel, Switzerland.
Déborah Tribouillard-TanvierInstitut de Biochimie et Génétique Cellulaires, CNRS UMR5095, Université de Bordeaux, Bordeaux, France.
Bruno SengerUniversité de Strasbourg, CNRS UMR7156, Génétique Moléculaire, Génomique, Microbiologie, Strasbourg, France.
Jean-Paul di RagoInstitut de Biochimie et Génétique Cellulaires, CNRS UMR5095, Université de Bordeaux, Bordeaux, France.
Sylvie FriantUniversité de Strasbourg, CNRS UMR7156, Génétique Moléculaire, Génomique, Microbiologie, Strasbourg, France.
Roza KucharczykInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.ORCID 0000-0002-8712-7535
Hubert Dominique BeckerUniversité de Strasbourg, CNRS UMR7156, Génétique Moléculaire, Génomique, Microbiologie, Strasbourg, France.ORCID 0000-0002-4102-7520
Centre National de la Recherche Scientifique · FRInstitute of Biochemistry and Biophysics, Polish Academy of Sciences · PLUniversity of Basel · CH

Funding

Mitochondrial to nuclear gene transfer via synthetic evolutionR01GM111873 · NIGMS · STANFORD UNIVERSITY · PI STEINMETZ, LARS M · 2015 to 2018
$1.3M
AFM-Téléthon N°21809Agence Nationale de la Recherche ANR-10-IDEX-0002-02National Science Centre of Poland UMO-2011-01-B-NZ1-03492National Science Centre of Poland UMO-2018-31-B-NZ3-01117NIGMS NIH HHS R01 GM111873NIH R01 5R01GM111873-02
6 · The paper itself

Abstract

A single nuclear gene can be translated into a dual localized protein that distributes between the cytosol and mitochondria. Accumulating evidences show that mitoproteomes contain lots of these dual localized proteins termed echoforms. Unraveling the existence of mitochondrial echoforms using current GFP (Green Fluorescent Protein) fusion microscopy approaches is extremely difficult because the GFP signal of the cytosolic echoform will almost inevitably mask that of the mitochondrial echoform. We therefore engineered a yeast strain expressing a new type of Split-GFP that we termed Bi-Genomic Mitochondrial-Split-GFP (BiG Mito-Split-GFP). Because one moiety of the GFP is translated from the mitochondrial machinery while the other is fused to the nuclear-encoded protein of interest translated in the cytosol, the self-reassembly of this Bi-Genomic-encoded Split-GFP is confined to mitochondria. We could authenticate the mitochondrial importability of any protein or echoform from yeast, but also from other organisms such as the human Argonaute 2 mitochondrial echoform.

Indexed as

CytosolFungal ProteinsGreen Fluorescent ProteinsMitochondriaMitochondrial ProteinsProtein TransportSaccharomyces cerevisiaeFungal ProteinsGreen Fluorescent ProteinsMitochondrial Proteinsaminoacyl-tRNA synthetaseargonaute 2 proteincell biologydual localized proteinimportmitochondriaS. cerevisiaeSplit-GFP

Identifiers

PMID32657755
PMCPMC7358010
OpenAlexW3040733466

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.