Evidence map›Paper›PMID 32656360›Full record

ArticleNPJ precision oncology2020

Integrated multiomics analysis of hepatoblastoma unravels its heterogeneity and provides novel druggable targets.

Masahiro Sekiguchi, Masafumi Seki, Tomoko Kawai, Kenichi Yoshida, Misa Yoshida, Tomoya Isobe, Noriko Hoshino, Ryota Shirai, Mio Tanaka, Ryota Souzaki and 31 more

Open access · goldAbstract read
In one paragraph

Article in NPJ precision oncology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed, 2 pooled it
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 2 syntheses or guidelines pooled it, 52 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  20. Frontiers in genetics · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

41 authors at 11 institutions in 2 countries.

Masahiro SekiguchiDepartment of Pediatrics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.ORCID 0000-0002-7941-9319
Masafumi SekiDepartment of Pediatrics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.ORCID 0000-0003-4671-7026
Tomoko KawaiDepartment of Maternal-Fetal Biology, National Research Institute for Child Health and Development, Tokyo, Japan.ORCID 0000-0001-8137-0334
Kenichi YoshidaDepartment of Pathology and Tumor Biology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.
Misa YoshidaDepartment of Pediatrics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Tomoya IsobeDepartment of Pediatrics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.ORCID 0000-0002-3487-3307
Noriko HoshinoDepartment of Pediatric Surgery, The University of Tokyo Hospital, Tokyo, Japan.
Ryota ShiraiChildren's Cancer Center, National Center for Child Health and Development, Tokyo, Japan.
Mio TanakaDepartment of Pathology, Kanagawa Children's Medical Center, Kanagawa, Japan.
Ryota SouzakiDepartment of Pediatric Surgery, Faculty of Medical Sciences, Kyushu University, Fukuoka, Japan.
Kentaro WatanabeDepartment of Pediatrics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.ORCID 0000-0003-0868-5289
Yuki ArakawaDepartment of Hematology/Oncology, Saitama Children's Medical Center, Saitama, Japan.
Yasuhito NannyaDepartment of Pathology and Tumor Biology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.
Hiromichi SuzukiDepartment of Pathology and Tumor Biology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.
Yoichi FujiiDepartment of Urology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Keisuke KataokaDivision of Molecular Oncology, National Cancer Center Research Institute, Tokyo, Japan.ORCID 0000-0002-8263-9902
Yuichi ShiraishiCenter for Cancer Genomics and Advanced Therapeutics, National Cancer Center Research Institute, Tokyo, Japan.
Kenichi ChibaCenter for Cancer Genomics and Advanced Therapeutics, National Cancer Center Research Institute, Tokyo, Japan.
Hiroko TanakaLaboratory of DNA Information Analysis, Human Genome Center, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan.ORCID 0000-0001-9634-8922
Teppei ShimamuraDepartment of Systems Biology, Graduate School of Medicine, Nagoya University, Nagoya, Japan.
Yusuke SatoDepartment of Urology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Aiko Sato-OtsuboDepartment of Pediatrics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Shunsuke KimuraDepartment of Pediatrics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.ORCID 0000-0002-2158-467X
Yasuo KubotaDepartment of Pediatrics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.ORCID 0000-0002-7909-5422
Mitsuteru HiwatariDepartment of Pediatrics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Katsuyoshi KohDepartment of Hematology/Oncology, Saitama Children's Medical Center, Saitama, Japan.
Yasuhide HayashiJobu University, Gunma, Japan.
Yutaka KanamoriDivision of Surgery, Department of Surgical Specialties, National Center for Child Health and Development, Tokyo, Japan.
Mureo KasaharaTransplantation Center, National Center for Child Health and Development, Tokyo, Japan.
Kenichi KohashiDepartment of Anatomic Pathology, Graduate School of Medical Sciences, Kyushu University, Fukuoka, Japan.
Motohiro KatoChildren's Cancer Center, National Center for Child Health and Development, Tokyo, Japan.
Takako YoshiokaDepartment of Pathology, National Center for Child Health and Development, Tokyo, Japan.
Kimikazu MatsumotoChildren's Cancer Center, National Center for Child Health and Development, Tokyo, Japan.
Akira OkaDepartment of Pediatrics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Tomoaki TaguchiDepartment of Pediatric Surgery, Faculty of Medical Sciences, Kyushu University, Fukuoka, Japan.
Masashi SanadaDepartment of Advanced Diagnosis, Clinical Research Center, Nagoya Medical Center, Nagoya, Japan.
Yukichi TanakaDepartment of Pathology, Kanagawa Children's Medical Center, Kanagawa, Japan.
Satoru MiyanoCenter for Cancer Genomics and Advanced Therapeutics, National Cancer Center Research Institute, Tokyo, Japan.
Kenichiro HataDepartment of Maternal-Fetal Biology, National Research Institute for Child Health and Development, Tokyo, Japan.
Seishi OgawaDepartment of Pathology and Tumor Biology, Graduate School of Medicine, Kyoto University, Kyoto, Japan.
Junko TakitaDepartment of Pediatrics, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.ORCID 0000-0002-2452-6520
The University of Tokyo · JPNational Center For Child Health and Development · JPKyoto University · JPKyushu University · JPKanagawa Children's Medical Center · JPSaitama Children's Medical Center · JPHiroshima University · JPJobu University · JPNagoya Medical Center · JPNagoya University · JPUniversity of Tokyo Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although hepatoblastoma is the most common pediatric liver cancer, its genetic heterogeneity and therapeutic targets are not well elucidated. Therefore, we conducted a multiomics analysis, including mutatome, DNA methylome, and transcriptome analyses, of 59 hepatoblastoma samples. Based on DNA methylation patterns, hepatoblastoma was classified into three clusters exhibiting remarkable correlation with clinical, histological, and genetic features. Cluster F was largely composed of cases with fetal histology and good outcomes, whereas clusters E1 and E2 corresponded primarily to embryonal/combined histology and poor outcomes. E1 and E2, albeit distinguishable by different patient age distributions, were genetically characterized by hypermethylation of the HNF4A/CEBPA-binding regions, fetal liver-like expression patterns, upregulation of the cell cycle pathway, and overexpression of

Indexed as

Cancer genomicsLiver cancerNext-generation sequencingPaediatric cancer

Identifiers

PMID32656360
PMCPMC7341754
OpenAlexW3038948724

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.