ArticleFrontiers in microbiology2020
Water Microbiota in Greenhouses With Soilless Cultures of Tomato by Metabarcoding and Culture-Dependent Approaches.
Article in Frontiers in microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.
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Who cites it
4 citing papers in PubMed.
- Soilless farming system design impacts the diversity and composition of microbiota.Applied and environmental microbiology · 2026Article
- Fertilization influences the substrate, rhizosphere, and endosphere bacteriome ofFrontiers in microbiology · 2025Article
- The EDEN ISS mobile test facility microbiome changes by cleaning and continued use.Frontiers in microbiomes · 2025Article
- The Hydroponic Rockwool Root Microbiome: Under Control or Underutilised?Microorganisms · 2023Review
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Authors and funding
7 authors.
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Abstract
Water supply, in hydroponic greenhouses, can originate from groundwater, surface water or rainwater stored in open tanks. To limit contamination of water supply, several methods have been used including active and passive methods such as slow filtration techniques which consist in passing the nutrient solutions slowly through filters. The purpose of this study was to describe the microbiota associated with water sampled before entering greenhouses and in recirculating nutrient solutions, either before or after running through a biofiltration system. Metabarcoding analysis revealed that water ecosystems were unique niches for diverse bacterial and fungal communities. Microbial composition varied greatly across storage conditions (groundwater vs. rainwater) and among greenhouses, suggesting that water microbiota is site- and storage-condition-specific. Nonetheless, we found that microbiota structure in open-stored water (either coming from ground or rain) shared a higher degree of similarity than with water directly pumped out of the ground. Open-stored waters were characterized by predominant taxa, notably those involved in aerobic chemoheterotrophy, such as the
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