Evidence map›Paper›PMID 32654263›Full record

ArticleHepatology (Baltimore, Md.)2020

Intestinal Virome in Patients With Alcoholic Hepatitis.

Lu Jiang, Sonja Lang, Yi Duan, Xinlian Zhang, Bei Gao, Jessica Chopyk, Leila K Schwanemann, Meritxell Ventura-Cots, Ramon Bataller, Francisco Bosques-Padilla and 19 more

Open access · greenAbstract read
In one paragraph

Article in Hepatology (Baltimore, Md.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 96 papers.

0numbers the graph read from it
0cells of the map it votes in
96citing papers in PubMed
10.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

96 citing papers in PubMed, 138 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Alternating High-Fat and Polysaccharide Diets Modulates Gut Phage-Bacterial Interplay.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Gut virome dynamics: from commensal to critical player in health and disease.Nature reviews. Gastroenterology & hepatology · 2026
    Review
  11. Review
  12. Review
  13. Review
  14. JHEP reports : innovation in hepatology · 2026
    Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Review
  20. Review

36 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 14 institutions in 8 countries.

Lu JiangDepartment of Medicine, University of California San Diego, La Jolla, CA.
Sonja LangDepartment of Medicine, University of California San Diego, La Jolla, CA.
Yi DuanDepartment of Medicine, University of California San Diego, La Jolla, CA.ORCID 0000-0002-6229-9461
Xinlian ZhangDivision of Biostatistics and Bioinformatics, Department of Family Medicine and Public Health, University of California San Diego, La Jolla, CA.
Bei GaoDepartment of Medicine, University of California San Diego, La Jolla, CA.
Jessica ChopykDepartment of Pathology, University of California San Diego, La Jolla, CA.
Leila K SchwanemannDepartment of Pathology, University of California San Diego, La Jolla, CA.
Meritxell Ventura-CotsDivision of Gastroenterology, Hepatology and Nutrition, Department of Medicine, Pittsburgh Liver Research Center, University of Pittsburgh Medical Center, Pittsburgh, PA.
Ramon BatallerDivision of Gastroenterology, Hepatology and Nutrition, Department of Medicine, Pittsburgh Liver Research Center, University of Pittsburgh Medical Center, Pittsburgh, PA.ORCID 0000-0002-1119-7799
Francisco Bosques-PadillaDepartment of Gastroenterology, University Hospital, Autonomous University of Nuevo LeonAutonomous University of Nuevo Leon, Monterrey, Mexico.
Elizabeth C VernaDivision of Digestive and Liver Diseases, Department of Medicine, Columbia University College of Physicians and Surgeons, New York, NY.
Juan G AbraldesDivision of Gastroenterology (Liver Unit), Department of Medicine, University of Alberta, Edmonton, Alberta, Canada.
Robert S BrownDivision of Gastroenterology and Hepatology, Weill Cornell Medical College, New York, NY.
Victor VargasLiver Unit, University Hospital Vall d'Hebron, Autonomous University of Barcelona, Barcelona, Spain.
Jose AltamiranoLiver Unit, University Hospital Vall d'Hebron, Autonomous University of Barcelona, Barcelona, Spain.
Juan CaballeríaBiomedical Research Networking Center in Hepatic and Digestive Diseases (CIBEREHD), Barcelona, Spain.
Debbie L ShawcrossInstitute of Liver Studies, King's College London School of Medicine at King's College Hospital, King's College Hospital, London, United Kingdom.ORCID 0000-0001-6133-4619
Samuel B HoDepartment of Medicine, University of California San Diego, La Jolla, CA.
Alexandre LouvetDepartment of Diseases of the Digestive System and INSERM Unit, Huriez Hospital, Lille, France.
Michael R LuceyDivision of Gastroenterology and Hepatology, Department of Medicine, University of Wisconsin School of Medicine and Public Health, Madison, WI.
Philippe MathurinDepartment of Diseases of the Digestive System and INSERM Unit, Huriez Hospital, Lille, France.
Guadalupe Garcia-TsaoSection of Digestive Diseases, Yale University School of Medicine, New Haven, CT.
Tatiana KisselevaDepartment of Medicine, University of California San Diego, La Jolla, CA.
David A BrennerDepartment of Medicine, University of California San Diego, La Jolla, CA.
Xin M TuDivision of Biostatistics and Bioinformatics, Department of Family Medicine and Public Health, University of California San Diego, La Jolla, CA.
Peter StärkelSt. Luc University Hospital, Catholic University of Louvain, Brussels, Belgium.
David PrideDepartment of Medicine, University of California San Diego, La Jolla, CA.
Derrick E FoutsJ. Craig Venter Institute, Rockville, MD.
Bernd SchnablDepartment of Medicine, University of California San Diego, La Jolla, CA.ORCID 0000-0002-6281-825X
University of California San Diego · USHebron University · PSInserm · FRUniversity of Pittsburgh Medical Center · USCliniques Universitaires Saint-Luc · BEColumbia University · USCornell University · USHospital Clínic de Barcelona · ESJ. Craig Venter Institute · USKing's College London · GBUniversidad Autónoma de Nuevo León · MXUniversity of Alberta · CAUniversity of Wisconsin–Madison · USYale University · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
The Southernearch Center for ALPD and CirrhosisP50AA011999 · NIAAA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ANNA S. GUKOVSKAYA · 1999 to 2026
$45.8M
San Diego Digestive Diseases Research CenterP30DK120515 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LARS ECKMANN, Bernd G. Schnabl · 2019 to 2026
$10.8M
The Role of the Intestinal Mycobiome in Alcoholic Liver DiseaseR01AA024726 · NIAAA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Bernd G. Schnabl · 2018 to 2026
$3.9M
Microbiome and intestinal innate immune response in alcoholic liver diseaseR01AA020703 · NIAAA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SCHNABL, BERND G. · 2011 to 2020
$3.6M
Microbiome as therapeutic target in alcoholic hepatitisU01AA026939 · NIAAA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI FOUTS, DERRICK E, SCHNABL, BERND G. · 2018 to 2022
$1.7M
The role of pathobionts in alcoholic liver diseaseI01BX004594 · VA · VA SAN DIEGO HEALTHCARE SYSTEM · PI Bernd G. Schnabl · 2019 to 2026
–
BLRD VA BX004594BLRD VA I01 BX004594NCATS NIH HHS UL1 TR001863NIAAA NIH HHS P50 AA011999NIAAA NIH HHS R01 AA020703NIAAA NIH HHS R01AA020703NIAAA NIH HHS R01 AA024726NIAAA NIH HHS R01 AA24726NIAAA NIH HHS U01 AA026939NIDDK NIH HHS P30 DK120515
6 · The paper itself

Abstract

BACKGROUND AND

aimsAlcoholic hepatitis (AH) is a severe manifestation of alcohol-associated liver disease (ALD) with high mortality. Although gut bacteria and fungi modulate disease severity, little is known about the effects of the viral microbiome (virome) in patients with ALD. APPROACH AND

resultsWe extracted virus-like particles from 89 patients with AH who were enrolled in a multicenter observational study, 36 with alcohol use disorder (AUD), and 17 persons without AUD (controls). Virus-like particles from fecal samples were fractionated using differential filtration techniques, and metagenomic sequencing was performed to characterize intestinal viromes. We observed an increased viral diversity in fecal samples from patients with ALD, with the most significant changes in samples from patients with AH. Escherichia-, Enterobacteria-, and Enterococcus phages were over-represented in fecal samples from patients with AH, along with significant increases in mammalian viruses such as Parvoviridae and Herpesviridae. Antibiotic treatment was associated with higher viral diversity. Specific viral taxa, such as Staphylococcus phages and Herpesviridae, were associated with increased disease severity, indicated by a higher median Model for End-Stage Liver Disease score, and associated with increased 90-day mortality.

conclusionsIn conclusion, intestinal viral taxa are altered in fecal samples from patients with AH and associated with disease severity and mortality. Our study describes an intestinal virome signature associated with AH.

Indexed as

AdultAgedAnimalsBacteriophagesCase-Control StudiesDNA, ViralEnd Stage Liver DiseaseFecesFemaleHepatitis, AlcoholicHerpesviridaeHumansIntestinal MucosaLiverLiver CirrhosisMaleDNA, ViralRNA, Viral

Identifiers

PMID32654263
PMCPMC8159727
OpenAlexW3042131132

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.