Evidence map›Paper›PMID 32652697›Full record

ArticleThe Plant journal : for cell and molecular biology2020

CURLED LATER1 encoding the largest subunit of the Elongator complex has a unique role in leaf development and meristem function in rice.

Hikari Matsumoto, Yukiko Yasui, Yoshihiro Ohmori, Wakana Tanaka, Tetsuya Ishikawa, Hisataka Numa, Kenta Shirasawa, Yojiro Taniguchi, Junichi Tanaka, Yasuhiro Suzuki and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Hikari MatsumotoSchool of Science, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo, 113-8654, Japan.ORCID 0000-0001-8046-2608
Yukiko YasuiSchool of Science, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo, 113-8654, Japan.
Yoshihiro OhmoriGraduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo-ku, Tokyo, 113-8657, Japan.
Wakana TanakaSchool of Science, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo, 113-8654, Japan.ORCID 0000-0002-2635-5462
Tetsuya IshikawaNARO, Kannondai 2-1-2, Tsukuba, 305-8518, Japan.
Hisataka NumaNARO, Kannondai 2-1-2, Tsukuba, 305-8518, Japan.
Kenta ShirasawaNARO, Kannondai 2-1-2, Tsukuba, 305-8518, Japan.ORCID 0000-0001-7880-6221
Yojiro TaniguchiNARO, Kannondai 2-1-2, Tsukuba, 305-8518, Japan.
Junichi TanakaNARO, Kannondai 2-1-2, Tsukuba, 305-8518, Japan.
Yasuhiro SuzukiNARO, Kannondai 2-1-2, Tsukuba, 305-8518, Japan.
Hiro-Yuki HiranoSchool of Science, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo, 113-8654, Japan.ORCID 0000-0001-7364-8893
Central Region Agricultural Research Center · JPThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Elongator complex, which is conserved in eukaryotes, has multiple roles in diverse organisms. In Arabidopsis thaliana, Elongator is shown to be involved in development, hormone action and environmental responses. However, except for Arabidopsis, our knowledge of its function is poor in plants. In this study, we initially carried out a genetic analysis to characterize a rice mutant with narrow and curled leaves, termed curled later1 (cur1). The cur1 mutant displayed a heteroblastic change, whereby the mutant leaf phenotype appeared specifically at a later adult phase of vegetative development. The shoot apical meristem (SAM) was small and the leaf initiation rate was low, suggesting that the activity of the SAM seemed to be partially reduced in cur1. We then revealed that CUR1 encodes a yeast ELP1-like protein, the largest subunit of Elongator. Furthermore, disruption of OsELP3 encoding the catalytic subunit of Elongator resulted in phenotypes similar to those of cur1, including the timing of the appearance of mutant phenotypes. Thus, Elongator activity seems to be specifically required for leaf development at the late vegetative phase. Transcriptome analysis showed that genes involved in protein quality control were highly upregulated in the cur1 shoot apex at the later vegetative phase, suggesting the restoration of impaired proteins probably produced by partial defects in translational control due to the loss of function of Elongator. The differences in the mutant phenotype and gene expression profile between CUR1 and its Arabidopsis ortholog suggest that Elongator has evolved to play a unique role in rice development.

Indexed as

Gene Expression ProfilingGene Expression Regulation, PlantGene Knockout TechniquesHistone AcetyltransferasesMeristemMultiprotein ComplexesMutationOryzaPeptide Elongation FactorsPhenotypePlant LeavesPlant ProteinsPlants, Genetically ModifiedProtein SubunitsSaccharomyces cerevisiae ProteinsHistone AcetyltransferasesIKI3 protein, S cerevisiaeMultiprotein ComplexesPeptide Elongation FactorsPlant ProteinsProtein SubunitsSaccharomyces cerevisiae Proteinsbulliform cellElongator complexheteroblastyleaf developmentprotein quality controlrice (Oryza sativa)sclerenchymashoot apical meristem

Identifiers

PMID32652697
PMCPMC7689840
OpenAlexW3042092999

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.