Evidence map›Paper›PMID 32651608›Full record

ArticleCurrent microbiology2020

Draft Genome Sequence of a Potential Organic Phosphorus-Degrading Bacterium Brevibacterium frigoritolerans GD44, Isolated from Radioactive Soil in Xinjiang, China.

Mengmeng Jin, Qianru Zhao, Zhi Zhou, Liying Zhu, Zhidong Zhang, Ling Jiang

Abstract read
PubMed Publisher
In one paragraph

Article in Current microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Whole-Genome Sequencing ofMicroorganisms · 2024
    Article
  5. Article
  6. Isolation and Degradation Characteristics of PBAT Film Degrading Bacteria.International journal of environmental research and public health · 2022
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Mengmeng JinCollege of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 210009, People's Republic of China.
Qianru ZhaoCollege of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 210009, People's Republic of China.
Zhi ZhouCollege of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing, 210009, People's Republic of China. kjczz@njtech.edu.cn.
Liying ZhuCollege of Chemical and Molecular Engineering, Nanjing Tech University, Nanjing, 210009, People's Republic of China.
Zhidong ZhangInstitute of Microbiology, Xinjiang Academy of Agricultural Sciences, Xinjiang Uigur Autonomous Region, Urumqi, People's Republic of China.
Ling JiangCollege of Food Science and Light Industry, Nanjing Tech University, Nanjing, 210009, People's Republic of China. jiangling@njtech.edu.cn.
Nanjing Tech University · CNXinjiang Academy of Agricultural Sciences · CN

Funding

Postgraduate Research & Practice Innovation Program of Jiangsu Province KYCX19_0872the National High Technology Research and Development Program of China 2012AA021705the National Key R&D Program of China 2018YFC1602805the National Science Foundation of China 21776136the National Science Foundation of China 31922070the National Science Foundation of China U1603112the Natural Science Foundation of Jiangsu Province BK20171461the Natural Science Foundation of Jiangsu Province BK20180038the Six Talent Peaks Project in Jiangsu Province 2015-JY-009
6 · The paper itself

Abstract

Brevibacterium frigoritolerans, a strain quite potential use in environmental pollution, is also able to degrade the pesticide phorate. Here, we report a strain isolated from radioactive soil in the Xinjiang Uygur Autonomous Region of China. The genome of strain GD44 encompasses 5,471,331 base pairs with a GC content of 40.42%. The sequence was assembled into 1985 open reading frames (ORFs) encoding 5053 proteins. Sequence analysis identified the genes encoding enzymes related to the degradation of organophosphorus compounds such as esterase, phosphotransferase, C-P lyase, and alkaline phosphatase. The nitrate reductase gene was also found in GD44, which was associated with biosynthesis of silver nanoparticles used for bacteriostat. In addition, Antibiotic Resistance Ontology (ARO) genes accounted for 10.6%, including the vancomycin resistance gene cluster. Therefore, the whole-genome sequence of B. frigoritolerans GD44 will be beneficial for identifying and analyzing genes utilized for soil remediation and antibacterial agent, which will provide genetic evaluation for potential application in the future.

Indexed as

BacillusGenome, BacterialOrganophosphatesSoil MicrobiologyBacterial ProteinsChinaEnzymesMetal NanoparticlesSilverSoil Pollutants, RadioactiveBacterial ProteinsEnzymesOrganophosphatesSilverSoil Pollutants, Radioactive

Identifiers

PMID32651608
OpenAlexW3040926777

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.