ArticleScientific reports2020
Evolutionary and phylogenetic aspects of the chloroplast genome of Chaenomeles species.
Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.
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43 citing papers in PubMed.
- Unraveling the Chloroplast Genome of Stellaria media: Comprehensive Analysis, Taxonomic Implications, and Evolutionary Perspectives.Biochemical genetics · 2026Article
- Comparative and phylogenetic analyses based on the complete chloroplast genomes of Limonium (Plumbaginaceae) species.BMC plant biology · 2025Article
- Phylogenomics and structural variations of plastid genomes of the columbine genus (Ranunculaceae).BMC plant biology · 2025Article
- Subfamily evolution analysis using nuclear and chloroplast data from the same reads.Scientific reports · 2025Article
- Complete chloroplast genome sequence of Artemisia littoricola (Asteraceae) from Dokdo Island Korea: genome structure, phylogenetic analysis, and biogeography study.Functional & integrative genomics · 2024Article
- Complete Chloroplast Genome ofGenes · 2024Article
- Genetic characterization and phylogenetic analysis of the Nigella sativa (black seed) plastome.Scientific reports · 2024Article
- Structure, gene composition, divergence time and phylogeny analysis of the woody desert species Neltuma alba, Neltuma chilensis and Strombocarpa strombulifera.Scientific reports · 2024Article
- Comparative plastome analyses and evolutionary relationships of 25 East Asian species within the medicinal plant genusFrontiers in plant science · 2024Article
- Analysis of phylogenetic relationships inFrontiers in plant science · 2024Article
- A chromosome-level genome assembly of Chinese quince (Frontiers in plant science · 2024Article
- Insights intoForestry research · 2024Article
- Comparative chloroplast genome analysis of four Polygonatum species insights into DNA barcoding, evolution, and phylogeny.Scientific reports · 2023Article
- The First Complete Chloroplast Genome ofGenes · 2023Article
- Chloroplast genome characterization of Uncaria guianensis and Uncaria tomentosa and evolutive dynamics of the Cinchonoideae subfamily.Scientific reports · 2023Article
- Article
- Comparative plastome genomics and phylogenetic relationships of the genusFrontiers in plant science · 2023Article
- Complete chloroplast genomes of Sorbus sensu stricto (Rosaceae): comparative analyses and phylogenetic relationships.BMC plant biology · 2022Article
- Comparative Analysis of the Complete Chloroplast Genomes of EightLife (Basel, Switzerland) · 2022Article
- Comparative analysis of Thalassionema chloroplast genomes revealed hidden biodiversity.BMC genomics · 2022Article
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7 authors.
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Abstract
Chaenomeles (family Rosaceae) is a genus of five diploid species of deciduous spiny shrubs that are native to Central Asia and Japan. It is an important horticultural crop (commonly known as flowering quinces) in Europe and Asia for its high yield in fruits that are rich in juice, aroma, and dietary fiber. Therefore, the development of effective genetic markers of Chaenomeles species is advantageous for crop improvement through breeding and selection. In this study, we successfully assembled and analyzed the chloroplast genome of five Chaenomeles species. The chloroplast genomes of the five Chaenomeles species were very similar with no structural or content rearrangements among them. The chloroplast genomes ranged from 159,436 to 160,040 bp in length and contained a total of 112 unique genes, including 78 protein-coding genes, 30 tRNAs, and 4 rRNAs. Three highly variable regions, including trnR-atpA, trnL-F, and rpl32-ccsA, were identified. Phylogenetic analysis based on the complete chloroplast genome showed that Chaenomeles forms a monophyletic clade and had a close relationship with the genera Docynia and Malus. Analyses for phylogenetic relationships and the development of available genetic markers in future could provide valuable information regarding genetics and breeding mechanisms of the Chaenomeles species.
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