Evidence map›Paper›PMID 32651179›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2020

Genomic Profiling of Prostate Cancers from Men with African and European Ancestry.

Yusuke Koga, Hanbing Song, Zachary R Chalmers, Justin Newberg, Eejung Kim, Jian Carrot-Zhang, Daphnee Piou, Paz Polak, Sarki A Abdulkadir, Elad Ziv and 4 more

Open access · greenAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
9.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 97 citations in OpenAlex.

  1. Subclonal Complete Loss of CDKN1B as a Common Genomic Alteration in Prostate Cancer: Associations With Race and Prostate Cancer Outcomes.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2026
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1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 1 country.

Yusuke Koga *Department of Medicine, Boston University School of Medicine, Boston, Massachusetts.
Hanbing Song *Division of Hematology/Oncology, Department of Medicine; Helen Diller Family Comprehensive Cancer Center; Bakar Computational Health Sciences Institute; Institute for Human Genetics; San Francisco Veterans Affairs Medical Center; University of California, San Francisco, San Francisco, California.ORCID 0000-0002-2164-8813
Zachary R Chalmers *Department of Urology, Northwestern University Feinberg School of Medicine.
Justin NewbergFoundation Medicine, Cambridge, Massachusetts.
Eejung KimBroad Institute of MIT and Harvard, Cambridge, Massachusetts.
Jian Carrot-ZhangBroad Institute of MIT and Harvard, Cambridge, Massachusetts.
Daphnee PiouBroad Institute of MIT and Harvard, Cambridge, Massachusetts.
Paz PolakMount Sinai School of Medicine, New York, New York.
Sarki A AbdulkadirDepartment of Urology, Northwestern University Feinberg School of Medicine.
Elad ZivDivision of General Internal Medicine, University of California, San Francisco, San Francisco, California.ORCID 0000-0002-2324-2884
Matthew MeyersonBroad Institute of MIT and Harvard, Cambridge, Massachusetts.
Garrett M FramptonFoundation Medicine, Cambridge, Massachusetts.ORCID 0000-0002-2361-2750
Joshua D Campbell *Department of Medicine, Boston University School of Medicine, Boston, Massachusetts. camp@bu.edu Franklin.Huang@ucsf.edu.ORCID 0000-0003-0780-8662
Franklin W Huang *Division of Hematology/Oncology, Department of Medicine; Helen Diller Family Comprehensive Cancer Center; Bakar Computational Health Sciences Institute; Institute for Human Genetics; San Francisco Veterans Affairs Medical Center; University of California, San Francisco, San Francisco, California. camp@bu.edu Franklin.Huang@ucsf.edu.
Broad Institute · USGlobalFoundries (United States) · USNorthwestern University · USBoston University · USMount Sinai Hospital · USSan Francisco General Hospital · USUniversity of California, San Francisco · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM008152 · NIGMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI ARDEHALI, HOSSEIN · 1987 to 2021
$24.0M
Research on Prostate Cancer in Men of African Ancestry: Defining the Roles of Genetics, Immunity and Stress (RESPOND)U19CA214253 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI HAIMAN, CHRISTOPHER ALAN · 2018 to 2023
$16.8M
Medical Scientist Training ProgramT32GM144295 · NIGMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI ALAN R HAUSER · 2022 to 2026
$9.1M
Precision Interception of Aggressive Prostate Cancer in African American MenP20CA233255 · NCI · DANA-FARBER CANCER INST · PI YAMOAH, KOSJ · 2018 to 2020
$3.2M
Mechanistic Basis of Resistance to Chemohormonal Treatment in Prostate CancerF30CA250248 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI CHALMERS, ZACHARY ROCKOW · 2020 to 2023
$206k
NCI NIH HHS F30 CA250248NCI NIH HHS P20 CA233255NCI NIH HHS U19 CA214253NIGMS NIH HHS T32 GM008152NIGMS NIH HHS T32 GM144295
6 · The paper itself

Abstract

purposeAfrican American (AFR) men have the highest mortality rate from prostate cancer (PCa) compared with men of other racial/ancestral groups. Differences in the spectrum of somatic genome alterations in tumors between AFR men and other populations have not been well-characterized due to a lack of inclusion of significant numbers in genomic studies. EXPERIMENTAL

designTo identify genomic alterations associated with race, we compared the frequencies of somatic alterations in PCa obtained from four publicly available datasets comprising 250 AFR and 611 European American (EUR) men and a targeted sequencing dataset from a commercial platform of 436 AFR and 3018 EUR men.

resultsMutations in

conclusionsAlthough we identified some novel differences in AFR men compared with other populations, the frequencies of genomic alterations in current therapeutic targets for PCa were similar between AFR and EUR men, suggesting that existing precision medicine approaches could be equally beneficial if applied equitably.

Indexed as

AdultAgedAged, 80 and overBiomarkers, TumorBlack or African AmericanDatasets as TopicDNA Copy Number VariationsDNA Mutational AnalysisDNA RepairGenomicsHealth Status DisparitiesHumansIncidenceMaleMiddle AgedMutationBiomarkers, Tumor

Identifiers

PMID32651179
PMCPMC7597977
OpenAlexW3041588542

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.