Evidence map›Paper›PMID 32650624›Full record

ArticleInternational journal of molecular sciences2020

Physiological Importance of Pectin Modifying Genes During Rice Pollen Development.

Yu-Jin Kim, Ho Young Jeong, Seung-Yeon Kang, Jeniffer Silva, Eui-Jung Kim, Soon Ki Park, Ki-Hong Jung, Chanhui Lee

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Evaluating Pollen Viability and Tube Growth in Rice (Oryza sativa).Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. CRISPR/Cas9 Mutant RiceInternational journal of molecular sciences · 2022
    Article
  13. Article
  14. Article
  15. Article
  16. Global Identification ofFrontiers in plant science · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Yu-Jin KimGraduate School of Biotechnology & Crop Biotech Institute, Kyung Hee University, Yongin 17104, Korea.ORCID 0000-0003-2562-615X
Ho Young JeongDepartment of Plant & Environmental New Resources, College of Life Sciences, Kyung Hee University, Yongin 17104, Korea.
Seung-Yeon KangGraduate School of Biotechnology & Crop Biotech Institute, Kyung Hee University, Yongin 17104, Korea.
Jeniffer SilvaGraduate School of Biotechnology & Crop Biotech Institute, Kyung Hee University, Yongin 17104, Korea.
Eui-Jung KimGraduate School of Biotechnology & Crop Biotech Institute, Kyung Hee University, Yongin 17104, Korea.
Soon Ki ParkSchool of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea.
Ki-Hong JungGraduate School of Biotechnology & Crop Biotech Institute, Kyung Hee University, Yongin 17104, Korea.ORCID 0000-0003-0427-5901
Chanhui LeeDepartment of Plant & Environmental New Resources, College of Life Sciences, Kyung Hee University, Yongin 17104, Korea.
Kyung Hee University · KRKyungpook National University · KR

Funding

National Research Foundation of Korea NRF-2019R1C1C1002636National Research Foundation of Korea NRF-2020R1A2C1004273Next-Generation BioGreen 21 Program PJ01366401Next-Generation BioGreen 21 Program PJ01369001
6 · The paper itself

Abstract

Although cell wall dynamics, particularly modification of homogalacturonan (HGA, a major component of pectin) during pollen tube growth, have been extensively studied in dicot plants, little is known about how modification of the pollen tube cell wall regulates growth in monocot plants. In this study, we assessed the role of HGA modification during elongation of the rice pollen tube by adding a pectin methylesterase (PME) enzyme or a PME-inhibiting catechin extract (Polyphenon 60) to in vitro germination medium. Both treatments led to a severe decrease in the pollen germination rate and elongation. Furthermore, using monoclonal antibodies toward methyl-esterified and de-esterified HGA epitopes, it was found that exogenous treatment of PME and Polyphenon 60 resulted in the disruption of the distribution patterns of low- and high-methylesterified pectins upon pollen germination and during pollen tube elongation. Eleven PMEs and 13 PME inhibitors (PMEIs) were identified by publicly available transcriptome datasets and their specific expression was validated by qRT-PCR. Enzyme activity assays and subcellular localization using a heterologous expression system in tobacco leaves demonstrated that some of the pollen-specific PMEs and PMEIs possessed distinct enzymatic activities and targeted either the cell wall or other compartments. Taken together, our findings are the first line of evidence showing the essentiality of HGA methyl-esterification status during the germination and elongation of pollen tubes in rice, which is primarily governed by the fine-tuning of PME and PMEI activities.

Indexed as

Carboxylic Ester HydrolasesCell WallGene Expression Regulation, PlantGerminationNicotianaOryzaPectinsPlant LeavesPlant ProteinsPollen TubePolyphenolsTranscriptomeCarboxylic Ester HydrolasespectinesterasePectinsPlant Proteinspolygalacturonic acidPolyphenolspolyphenon-60pectinpectin methylesterasepectin methylesterase inhibitorpollenpollen tube growthrice

Identifiers

PMID32650624
PMCPMC7402328
OpenAlexW3042176826

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.