ArticlePloS one2020
Nitrate deficiency decreased photosynthesis and oxidation-reduction processes, but increased cellular transport, lignin biosynthesis and flavonoid metabolism revealed by RNA-Seq in Oryza sativa leaves.
Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed, 55 citations in OpenAlex.
- Coordinated Application of Nitrogen and Sulfur Synergistically Enhances Grain Yield and Grain Protein Concentration of Rice by Regulating Plant Growth.Plants (Basel, Switzerland) · 2026Article
- Exogenous NO enhances drought tolerance in alfalfa via the lignin synthesis pathway.BMC genomics · 2026Article
- Nitrogen deficiency restricts gall development by altering metabolic and hormonal networks inFrontiers in plant science · 2026Article
- Ecological divergence of sibling allopolyploid marsh orchids is associated with species specific plasticity and distinct fungal communities.The Plant journal : for cell and molecular biology · 2025Article
- Integrative transcriptomic-physiological analysis deciphers nitrogen-mediated carbon reallocation balancing growth and flavonoid metabolism inFrontiers in plant science · 2025Article
- Effects of Nitrogen Deficiency on the Photosynthesis, ChlorophyllInternational journal of molecular sciences · 2024Article
- Genome-Wide Identification and Characterization of Long Non-Coding RNAs in Roots of Rice Seedlings under Nitrogen Deficiency.Plants (Basel, Switzerland) · 2023Article
- An Integrated Analysis of Metabolome, Transcriptome, and Physiology Revealed the Molecular and Physiological Response ofPlants (Basel, Switzerland) · 2023Article
- Molecular and physiological mechanisms of tea (Camellia sinensis (L.) O. Kuntze) leaf and root in response to nitrogen deficiency.BMC genomics · 2023Article
- Varietal responses of root characteristics to low nitrogen application explain the differing nitrogen uptake and grain yield in two rice varieties.Frontiers in plant science · 2023Article
- Effect of Interactions between Phosphorus and Light Intensity on Metabolite Compositions in Tea Cultivar Longjing43.International journal of molecular sciences · 2022Article
- Effects of Nitrogen Deficiency on the Metabolism of Organic Acids and Amino Acids inPlants (Basel, Switzerland) · 2022Article
- Lignin Synthesis, Affected by Sucrose in Lotus (International journal of molecular sciences · 2022Article
- Identification of Twelve Different Mineral Deficiencies in Hydroponically Grown Sunflower Plants on the Basis of Short Measurements of the Fluorescence and P700 Oxidation/Reduction Kinetics.Frontiers in plant science · 2022Article
- Light Harvesting-like Protein 3 Interacts with Phytoene Synthase and Is Necessary for Carotenoid and Chlorophyll Biosynthesis in Rice.Rice (New York, N.Y.) · 2021Article
- Metabolomics and Transcriptomics Integration of Early Response ofFrontiers in plant science · 2021Article
- Signaling Responses to N Starvation: Focusing on Wheat and Filling the Putative Gaps With Findings Obtained in Other Plants. A Review.Frontiers in plant science · 2021Review
- Gene Co-Expression Networks Highlight Key Nodes Associated With Ammonium Nitrate in Sugarcane.Physiologia plantarumArticle
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4 authors at 1 institution in 1 country.
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Abstract
Rice cultivar "Weiyou916" (Oryza sativa L. ssp. Indica) were cultured with control (10 mM NO3-) and nitrate deficient solution (0 mM NO3-) for four weeks. Nitrogen (N) deficiency significantly decreased the content of N and P, dry weight (DW) of the shoots and roots, but increased the ratio of root to shoot in O. sativa. N deficiency decreased the photosynthesis rate and the maximum quantum yield of primary photochemistry (Fv/Fm), however, increased the intercellular CO2 concentration and primary fluorescence (Fo). N deficiency significantly increased the production of H2O2 and membrane lipid peroxidation revealed as increased MDA content in O. sativa leaves. N deficiency significantly increased the contents of starch, sucrose, fructose, and malate, but did not change that of glucose and total soluble protein in O. sativa leaves. The accumulated carbohydrates and H2O2 might further accelerate biosynthesis of lignin in O. sativa leaves under N limitation. A total of 1635 genes showed differential expression in response to N deficiency revealed by Illumina sequencing. Gene Ontology (GO) analysis showed that 195 DEGs were found to highly enrich in nine GO terms. Most of DEGs involved in photosynthesis, biosynthesis of ethylene and gibberellins were downregulated, whereas most of DEGs involved in cellular transport, lignin biosynthesis and flavonoid metabolism were upregulated by N deficiency in O. sativa leaves. Results of real-time quantitative PCR (RT-qPCR) further verified the RNA-Seq data. For the first time, DEGs involved oxygen-evolving complex, phosphorus response and lignin biosynthesis were identified in rice leaves. Our RNA-Seq data provided a global view of transcriptomic profile of principal processes implicated in the adaptation of N deficiency in O. sativa and shed light on the candidate direction in rice breeding for green and sustainable agriculture.
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