Evidence map›Paper›PMID 32647329›Full record

ArticleCommunications biology2020

Sequence-based genetic mapping of Cynodon dactylon Pers. reveals new insights into genome evolution in Poaceae.

Tilin Fang, Hongxu Dong, Shuhao Yu, Justin Q Moss, Charles H Fontanier, Dennis L Martin, Jinmin Fu, Yanqi Wu

Abstract read
In one paragraph

Article in Communications biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Research Progress and Prospects of Molecular Breeding in Bermudagrass (International journal of molecular sciences · 2024
    Review
  5. Article
  6. Article
  7. Review
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Tilin FangPlant and Soil Sciences Department, Oklahoma State University, Stillwater, OK, 74078, USA.
Hongxu DongPlant and Soil Sciences Department, Mississippi State University, Starkville, MS, 39762, USA.
Shuhao YuPlant and Soil Sciences Department, Oklahoma State University, Stillwater, OK, 74078, USA.
Justin Q MossHorticulture and Landscape Architecture Department, Oklahoma State University, Stillwater, OK, 74078, USA.ORCID http://orcid.org/0000-0002-6758-3488
Charles H FontanierHorticulture and Landscape Architecture Department, Oklahoma State University, Stillwater, OK, 74078, USA.
Dennis L MartinHorticulture and Landscape Architecture Department, Oklahoma State University, Stillwater, OK, 74078, USA.
Jinmin FuCoastal Salt Tolerant Grass Engineering and Technology Research Center, Ludong University, Yantai, China.
Yanqi WuPlant and Soil Sciences Department, Oklahoma State University, Stillwater, OK, 74078, USA. yanqi.wu@okstate.edu.ORCID http://orcid.org/0000-0003-0802-6881

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bermudagrass (Cynodon dactylon Pers.) is an important warm-season perennial used extensively for turf, forage, soil conservation and remediation worldwide. However, limited genomic information has hindered the application of molecular tools towards understanding genome evolution and in breeding new cultivars. We genotype a first-generation selfed population derived from the tetraploid (4x = 36) 'A12359' using genotyping-by-sequencing. A high-density genetic map of 18 linkage groups (LGs) is constructed with 3,544 markers. Comparative genomic analyses reveal that each of nine homeologous LG pairs of C. dactylon corresponds to one of the first nine chromosomes of Oropetium thomaeum. Two nested paleo-ancestor chromosome fusions (ρ6-ρ9-ρ6, ρ2-ρ10-ρ2) may have resulted in a 12-to-10 chromosome reduction. A segmental dissemination of the paleo-chromosome ρ12 (ρ1-ρ12-ρ1, ρ6-ρ12-ρ6) leads to the 10-to-9 chromosome reduction in C. dactylon genome. The genetic map will assist in an ongoing whole genome sequence assembly and facilitate marker-assisted selection (MAS) in developing new cultivars.

Indexed as

Evolution, MolecularGenetic LinkageGenome, PlantPlant BreedingPolymorphism, Single NucleotideChromosome MappingChromosomes, PlantCynodon

Identifiers

PMID32647329
PMCPMC7347563

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.