Evidence map›Paper›PMID 32647236›Full record

ArticleScientific reports2020

Simplified modeling of E. coli mortality after genome damage induced by UV-C light exposure.

Jaime Sánchez-Navarrete, Nancy Jannet Ruiz-Pérez, Armando Guerra-Trejo, Julia Dolores Toscano-Garibay

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 8 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Jaime Sánchez-NavarreteLaboratorio de Investigación en Toxicología, Hospital Juárez de México, Av. Instituto Politécnico Nacional #5160 Col. Magdalena de Las Salinas, Ciudad de México, Mexico, C.P. 07760, Mexico.
Nancy Jannet Ruiz-PérezLaboratorio de Investigación en Toxicología, Hospital Juárez de México, Av. Instituto Politécnico Nacional #5160 Col. Magdalena de Las Salinas, Ciudad de México, Mexico, C.P. 07760, Mexico.
Armando Guerra-TrejoDepartamento de Biofísica, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Prolongación de Carpio Y Plan de Ayala S/N, Col. Santo Tomás, Ciudad de México, Mexico, C.P. 11340, Mexico.
Julia Dolores Toscano-GaribayLaboratorio de Investigación en Toxicología, Hospital Juárez de México, Av. Instituto Politécnico Nacional #5160 Col. Magdalena de Las Salinas, Ciudad de México, Mexico, C.P. 07760, Mexico. julia.toscano@gmail.com.
Instituto Politécnico Nacional · MXHospital Juárez de México · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

UV light is a group of high-energy waves from the electromagnetic spectrum. There are three types of UV radiations: UV-A, -B and -C. UV-C light are the highest in energy, but most are retained by the ozone layer. UV-A and -B reach the earth's surface and cause damage on living organisms, being considered as mutagenic physical agents. Numerous test models are used to study UV mutagenicity; some include special lamps, cell cultures and mathematical modeling. Mercury lamps are affordable and useful sources of UV-C light due to their emission at near the maximum absorption peak of nucleic acids. E. coli cultures are widely used because they have DNA-damage and -repairing mechanisms fairly similar to humans. In here we present two simple models that describe UV-C light incidence on a genome matrix, using fundamental quantum-mechanical concepts and considering light as a particle with a discontinuous distribution. To test the accuracy of our equations, stationary phase cultures of several E. coli strains were exposed to UV-C light in 30 s-intervals. Surviving CFUs were counted and survival/mortality curves were constructed. These graphs adjusted with high goodness of fit to the regression predictions. Results were also analyzed using three main parameters: quantum yield, specific speed and time of mortality.

Indexed as

Genome, BacterialAlgorithmsDNA DamageEscherichia coliIncidenceLeast-Squares AnalysisLightModels, BiologicalMutagensRegression AnalysisReproducibility of ResultsStem CellsUltraviolet RaysMutagens

Identifiers

PMID32647236
PMCPMC7347587
OpenAlexW3040779348

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.