Evidence map›Paper›PMID 32647180›Full record

ArticleNature communications2020

The structures of two archaeal type IV pili illuminate evolutionary relationships.

Fengbin Wang, Diana P Baquero, Zhangli Su, Leticia C Beltran, David Prangishvili, Mart Krupovic, Edward H Egelman

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 46 citations in OpenAlex.

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  14. Understanding a Core Pilin of the Type IVa Pili ofJournal of microbiology and biotechnology · 2024
    Article
  15. Article
  16. Review
  17. The evolution of archaeal flagellar filaments.Proceedings of the National Academy of Sciences of the United States of America · 2023
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  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Fengbin Wang *Department of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA, 22908, USA.
Diana P Baquero *Archaeal Virology Unit, Department of Microbiology Institut Pasteur, 25 rue du Dr. Roux, Paris, 75015, France.ORCID http://orcid.org/0000-0002-7473-4168
Zhangli SuDepartment of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA, 22908, USA.
Leticia C BeltranDepartment of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA, 22908, USA.
David PrangishviliArchaeal Virology Unit, Department of Microbiology Institut Pasteur, 25 rue du Dr. Roux, Paris, 75015, France.
Mart KrupovicArchaeal Virology Unit, Department of Microbiology Institut Pasteur, 25 rue du Dr. Roux, Paris, 75015, France. mart.krupovic@pasteur.fr.
Edward H EgelmanDepartment of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, VA, 22908, USA. egelman@virginia.edu.ORCID http://orcid.org/0000-0003-4844-5212
University of Virginia · USInstitut Pasteur · FRTbilisi State University · GE

Funding

Cryo-EM of Helical Protein and Nucleoprotein Polymers at Near Atomic ResolutionR35GM122510 · NIGMS · UNIVERSITY OF VIRGINIA · PI EDWARD H. EGELMAN · 2017 to 2026
$7.3M
Molecular Electron Microscopy Core Facility ImprovementsG20RR031199 · NCRR · UNIVERSITY OF VIRGINIA · PI SHUPNIK, MARGARET A · 2010 to 2010
$2.0M
NCRR NIH HHS G20 RR031199NIGMS NIH HHS R35 GM122510
6 · The paper itself

Abstract

We have determined the cryo-electron microscopic (cryo-EM) structures of two archaeal type IV pili (T4P), from Pyrobaculum arsenaticum and Saccharolobus solfataricus, at 3.8 Å and 3.4 Å resolution, respectively. This triples the number of high resolution archaeal T4P structures, and allows us to pinpoint the evolutionary divergence of bacterial T4P, archaeal T4P and archaeal flagellar filaments. We suggest that extensive glycosylation previously observed in T4P of Sulfolobus islandicus is a response to an acidic environment, as at even higher temperatures in a neutral environment much less glycosylation is present for Pyrobaculum than for Sulfolobus and Saccharolobus pili. Consequently, the Pyrobaculum filaments do not display the remarkable stability of the Sulfolobus filaments in vitro. We identify the Saccharolobus and Pyrobaculum T4P as host receptors recognized by rudivirus SSRV1 and tristromavirus PFV2, respectively. Our results illuminate the evolutionary relationships among bacterial and archaeal T4P filaments and provide insights into archaeal virus-host interactions.

Indexed as

Biological EvolutionAmino Acid SequenceArchaeaArchaeal ProteinsConserved SequenceGlycosylationProtein DomainsProtein Structure, SecondaryArchaeal Proteins

Identifiers

PMID32647180
PMCPMC7347861
OpenAlexW3041385524

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.