Evidence map›Paper›PMID 32647108›Full record

ArticleNature communications2020

Antisense oligonucleotide modulation of non-productive alternative splicing upregulates gene expression.

Kian Huat Lim, Zhou Han, Hyun Yong Jeon, Jacob Kach, Enxuan Jing, Sebastien Weyn-Vanhentenryck, Mikaela Downs, Anna Corrionero, Raymond Oh, Juergen Scharner and 6 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 131 papers.

0numbers the graph read from it
0cells of the map it votes in
131citing papers in PubMed
8.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

131 citing papers in PubMed, 186 citations in OpenAlex.

  1. Article
  2. Review
  3. Targeted gene editing ofMolecular therapy. Nucleic acids · 2026
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  6. Review
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  19. Genetic therapies for neurological diseases.Pharmacological reviews · 2026
    Review
  20. Review

71 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 1 institution in 1 country.

Kian Huat Lim *Stoke Therapeutics, Inc., Bedford, MA, USA.
Zhou Han *Stoke Therapeutics, Inc., Bedford, MA, USA.ORCID http://orcid.org/0000-0001-5264-8202
Hyun Yong JeonStoke Therapeutics, Inc., Bedford, MA, USA.
Jacob KachStoke Therapeutics, Inc., Bedford, MA, USA.
Enxuan JingStoke Therapeutics, Inc., Bedford, MA, USA.
Sebastien Weyn-VanhentenryckStoke Therapeutics, Inc., Bedford, MA, USA.
Mikaela DownsStoke Therapeutics, Inc., Bedford, MA, USA.
Anna CorrioneroStoke Therapeutics, Inc., Bedford, MA, USA.
Raymond OhStoke Therapeutics, Inc., Bedford, MA, USA.ORCID http://orcid.org/0000-0002-4525-8684
Juergen ScharnerStoke Therapeutics, Inc., Bedford, MA, USA.ORCID http://orcid.org/0000-0002-1110-8688
Aditya VenkateshStoke Therapeutics, Inc., Bedford, MA, USA.
Sophina JiStoke Therapeutics, Inc., Bedford, MA, USA.
Gene LiauStoke Therapeutics, Inc., Bedford, MA, USA.
Barry TichoStoke Therapeutics, Inc., Bedford, MA, USA.
Huw NashStoke Therapeutics, Inc., Bedford, MA, USA.
Isabel AznarezStoke Therapeutics, Inc., Bedford, MA, USA. iaznarez@stoketherapeutics.com.ORCID http://orcid.org/0000-0001-6076-350X
Stroke Association · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

While most monogenic diseases are caused by loss or reduction of protein function, the need for technologies that can selectively increase levels of protein in native tissues remains. Here we demonstrate that antisense-mediated modulation of pre-mRNA splicing can increase endogenous expression of full-length protein by preventing naturally occurring non-productive alternative splicing and promoting generation of productive mRNA. Bioinformatics analysis of RNA sequencing data identifies non-productive splicing events in 7,757 protein-coding human genes, of which 1,246 are disease-associated. Antisense oligonucleotides targeting multiple types of non-productive splicing events lead to increases in productive mRNA and protein in a dose-dependent manner in vitro. Moreover, intracerebroventricular injection of two antisense oligonucleotides in wild-type mice leads to a dose-dependent increase in productive mRNA and protein in the brain. The targeting of natural non-productive alternative splicing to upregulate expression from wild-type or hypomorphic alleles provides a unique approach to treating genetic diseases.

Indexed as

Alternative SplicingGene Expression RegulationAllelesAnimalsAnimals, NewbornBrainComputational BiologyExonsFemaleGene ExpressionHEK293 CellsHumansIntronsMaleMiceMice, Inbred C57BLOligonucleotides, AntisenseRNA, Messenger

Identifiers

PMID32647108
PMCPMC7347940
OpenAlexW3040712690

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.