Evidence map›Paper›PMID 32645145›Full record

ArticleGenome biology and evolution2020

Evolution of Mutation Rate in Astronomically Large Phytoplankton Populations.

Marc Krasovec, Rosalind E M Rickaby, Dmitry A Filatov

Abstract read
In one paragraph

Article in Genome biology and evolution, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
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  4. Review
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  9. How Can We Resolve Lewontin's Paradox?Genome biology and evolution · 2022
    Article
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  11. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

3 authors.

Marc KrasovecDepartment of Plant Sciences, University of Oxford, United Kingdom.
Rosalind E M RickabyDepartment of Earth Sciences, University of Oxford, United Kingdom.
Dmitry A FilatovDepartment of Plant Sciences, University of Oxford, United Kingdom.

Funding

Biotechnology and Biological Sciences Research Council BB/P009808/1Wellcome Trust
6 · The paper itself

Abstract

Genetic diversity is expected to be proportional to population size, yet, there is a well-known, but unexplained lack of genetic diversity in large populations-the "Lewontin's paradox." Larger populations are expected to evolve lower mutation rates, which may help to explain this paradox. Here, we test this conjecture by measuring the spontaneous mutation rate in a ubiquitous unicellular marine phytoplankton species Emiliania huxleyi (Haptophyta) that has modest genetic diversity despite an astronomically large population size. Genome sequencing of E. huxleyi mutation accumulation lines revealed 455 mutations, with an unusual GC-biased mutation spectrum. This yielded an estimate of the per site mutation rate µ = 5.55×10-10 (CI 95%: 5.05×10-10 - 6.09×10-10), which corresponds to an effective population size Ne ∼ 2.7×106. Such a modest Ne is surprising for a ubiquitous and abundant species that accounts for up to 10% of global primary productivity in the oceans. Our results indicate that even exceptionally large populations do not evolve mutation rates lower than ∼10-10 per nucleotide per cell division. Consequently, the extreme disparity between modest genetic diversity and astronomically large population size in the plankton species cannot be explained by an unusually low mutation rate.

Indexed as

Biological EvolutionMutation RatePhytoplanktonCodon UsageHaptophytaMutation AccumulationPopulation Densitycodon biaseffective population sizeEmiliania huxleyiLewontin’s paradoxmutation accumulationmutation ratephytoplankton evolution

Identifiers

PMID32645145
PMCPMC7486954

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