Evidence map›Paper›PMID 32643866›Full record

ArticleMolecular plant pathology2020

Type VI secretion systems of plant-pathogenic Burkholderia glumae BGR1 play a functionally distinct role in interspecies interactions and virulence.

Namgyu Kim, Jin Ju Kim, Inyoung Kim, Mohamed Mannaa, Jungwook Park, Juyun Kim, Hyun-Hee Lee, Sais-Beul Lee, Dong-Soo Park, Woo Jun Sul and 1 more

Open access · goldAbstract read
In one paragraph

Article in Molecular plant pathology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 35 citations in OpenAlex.

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  17. Article
  18. Exploring the comparative genome of rice pathogenFrontiers in plant science · 2024
    Article
  19. UnderstandingPlants (Basel, Switzerland) · 2023
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Namgyu KimDepartment of Integrated Biological Science, Pusan National University, Busan, Korea.
Jin Ju KimDepartment of Systems Biotechnology, Chung-Ang University, Anseong, Korea.
Inyoung KimDepartment of Integrated Biological Science, Pusan National University, Busan, Korea.
Mohamed MannaaDepartment of Integrated Biological Science, Pusan National University, Busan, Korea.
Jungwook ParkDepartment of Integrated Biological Science, Pusan National University, Busan, Korea.
Juyun KimDepartment of Integrated Biological Science, Pusan National University, Busan, Korea.
Hyun-Hee LeeDepartment of Integrated Biological Science, Pusan National University, Busan, Korea.
Sais-Beul LeeNational Institute of Crop Science, Milyang, Korea.
Dong-Soo ParkNational Institute of Crop Science, Milyang, Korea.
Woo Jun SulDepartment of Systems Biotechnology, Chung-Ang University, Anseong, Korea.
Young-Su SeoDepartment of Integrated Biological Science, Pusan National University, Busan, Korea.ORCID 0000-0001-9191-1405
Pusan National University · KRRural Development Administration · KRChung-Ang University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the environment, bacteria show close association, such as interspecies interaction, with other bacteria as well as host organisms. The type VI secretion system (T6SS) in gram-negative bacteria is involved in bacterial competition or virulence. The plant pathogen Burkholderia glumae BGR1, causing bacterial panicle blight in rice, has four T6SS gene clusters. The presence of at least one T6SS gene cluster in an organism indicates its distinct role, like in the bacterial and eukaryotic cell targeting system. In this study, deletion mutants targeting four tssD genes, which encode the main component of T6SS needle formation, were constructed to functionally dissect the four T6SSs in B. glumae BGR1. We found that both T6SS group_4 and group_5, belonging to the eukaryotic targeting system, act independently as bacterial virulence factors toward host plants. In contrast, T6SS group_1 is involved in bacterial competition by exerting antibacterial effects. The ΔtssD1 mutant lost the antibacterial effect of T6SS group_1. The ΔtssD1 mutant showed similar virulence as the wild-type BGR1 in rice because the ΔtssD1 mutant, like the wild-type BGR1, still has key virulence factors such as toxin production towards rice. However, metagenomic analysis showed different bacterial communities in rice infected with the ΔtssD1 mutant compared to wild-type BGR1. In particular, the T6SS group_1 controls endophytic plant-associated bacteria such as Luteibacter and Dyella in rice plants and may have an advantage in competing with endophytic plant-associated bacteria for settlement inside rice plants in the environment. Thus, B. glumae BGR1 causes disease using T6SSs with functionally distinct roles.

Indexed as

Bacterial Secretion SystemsBurkholderiaMetagenomicsOryzaType VI Secretion SystemsVirulenceBacterial Secretion SystemsType VI Secretion Systemsbacterial competitionbacterial virulenceBurkholderia glumaeinterspecies interactionmetagenomic analysisTssDtype VI secretion system

Identifiers

PMID32643866
PMCPMC7368126
OpenAlexW3040897417

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.