Evidence map›Paper›PMID 32642925›Full record

ReviewJournal of industrial microbiology & biotechnology2020

Metabolic engineering of Escherichia coli for production of chemicals derived from the shikimate pathway.

Zhu Li, Huiying Wang, Dongqin Ding, Yongfei Liu, Huan Fang, Zhishuai Chang, Tao Chen, Dawei Zhang

Open access · bronzeAbstract readReview
PubMed Publisher
In one paragraph

Review in Journal of industrial microbiology & biotechnology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 25 citations in OpenAlex.

  1. Structural and Biochemical Analysis of 3-Dehydroquinate Dehydratase fromJournal of microbiology and biotechnology · 2023
    Article
  2. Article
  3. Synthetic mutualism in engineeredEngineering in life sciences · 2023
    Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Shikimate Metabolic Pathway Engineering inJournal of microbiology and biotechnology · 2021
    Article
  10. Enhanced Protocatechuic Acid Production From Glucose UsingFrontiers in bioengineering and biotechnology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Zhu LiFrontier Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering (Ministry of Education); SynBio Research Platform, Collaborative Innovation Center of Chemical Science and Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, China.
Huiying WangKey Laboratory of Systems Microbial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China.
Dongqin DingKey Laboratory of Systems Microbial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China.
Yongfei LiuKey Laboratory of Systems Microbial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China.
Huan FangKey Laboratory of Systems Microbial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China.
Zhishuai ChangFrontier Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering (Ministry of Education); SynBio Research Platform, Collaborative Innovation Center of Chemical Science and Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, China.
Tao ChenFrontier Science Center for Synthetic Biology and Key Laboratory of Systems Bioengineering (Ministry of Education); SynBio Research Platform, Collaborative Innovation Center of Chemical Science and Engineering, School of Chemical Engineering and Technology, Tianjin University, Tianjin, 300072, China. chentao@tju.edu.cn.
Dawei ZhangKey Laboratory of Systems Microbial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China. zhang_dw@tib.cas.cn.ORCID http://orcid.org/0000-0002-5857-394X
Tianjin University · CNTianjin Institute of Industrial Biotechnology · CNUniversity of Chinese Academy of Sciences · CNChinese Academy of Sciences · CN

Funding

Foundation for Distinguished Young Talents in Higher Education of Guangdong (CN) 17JCJQJC45300Key Technology Research and Development Program of Shandong (CN) 2018YFA0900302the National Natural Science Foundation of China 2018YFA0901600the Science and Technology Service Network (STS) Initiative of the Chinese Academy of Sciences KFJ-STS-ZDTP-065
6 · The paper itself

Abstract

The shikimate pathway is indispensable for the biosynthesis of natural products with aromatic moieties. These products have wide current and potential applications in food, cosmetics and medicine, and consequently have great commercial value. However, compounds extracted from various plants or synthesized from petrochemicals no longer satisfy the requirements of contemporary industries. As a result, an increasing number of studies has focused on this pathway to enable the biotechnological manufacture of natural products, especially in E. coli. Furthermore, the development of synthetic biology, systems metabolic engineering and high flux screening techniques has also contributed to improving the biosynthesis of high-value compounds based on the shikimate pathway. Here, we review approaches based on a combination of traditional and new metabolic engineering strategies to increase the metabolic flux of the shikimate pathway. In addition, applications of this optimized pathway to produce aromatic amino acids and a range of natural products is also elaborated. Finally, this review sums up the opportunities and challenges facing this field.

Indexed as

Metabolic EngineeringAmino Acids, AromaticBiological ProductsBiotechnologyChorismic AcidEscherichia coliFermentationMetabolomicsShikimic AcidSynthetic BiologyAmino Acids, AromaticBiological ProductsChorismic AcidShikimic AcidAromatic amino acidsE. coliNatural productsShikimate pathway

Identifiers

PMID32642925
OpenAlexW3040809547

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.