Evidence map›Paper›PMID 32641690›Full record

ArticleScientific reports2020

Genetic spectrum of retinal dystrophies in Tunisia.

Imen Habibi, Yosra Falfoul, Ahmed Turki, Asma Hassairi, Khaled El Matri, Ahmed Chebil, Daniel F Schorderet, Leila El Matri

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
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  13. Next-Generation Sequencing Applications for Inherited Retinal Diseases.International journal of molecular sciences · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Imen HabibiIRO-Institute for Research in Ophthalmology, Av du Grand-Champsec 64, 1950, Sion, Switzerland. imen.habibi@irovision.ch.ORCID http://orcid.org/0000-0002-0465-8585
Yosra FalfoulOculogenetic Laboratory LR14SP01, Hedi Rais Institute of Ophthalmology (Department B), Tunis, Tunisia.
Ahmed TurkiOculogenetic Laboratory LR14SP01, Hedi Rais Institute of Ophthalmology (Department B), Tunis, Tunisia.
Asma HassairiOculogenetic Laboratory LR14SP01, Hedi Rais Institute of Ophthalmology (Department B), Tunis, Tunisia.
Khaled El MatriOculogenetic Laboratory LR14SP01, Hedi Rais Institute of Ophthalmology (Department B), Tunis, Tunisia.ORCID http://orcid.org/0000-0002-7939-3251
Ahmed ChebilOculogenetic Laboratory LR14SP01, Hedi Rais Institute of Ophthalmology (Department B), Tunis, Tunisia.
Daniel F SchorderetIRO-Institute for Research in Ophthalmology, Av du Grand-Champsec 64, 1950, Sion, Switzerland.ORCID http://orcid.org/0000-0002-1331-504X
Leila El MatriOculogenetic Laboratory LR14SP01, Hedi Rais Institute of Ophthalmology (Department B), Tunis, Tunisia.
Institut de Recherche en Opthalmologie · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We report the molecular basis of the largest Tunisian cohort with inherited retinal dystrophies (IRD) reported to date, identify disease-causing pathogenic variants and describe genotype-phenotype correlations. A subset of 26 families from a cohort of 73 families with clinical diagnosis of autosomal recessive IRD (AR-IRD) excluding Usher syndrome was analyzed by whole exome sequencing and autozygosity mapping. Causative pathogenic variants were identified in 50 families (68.4%), 42% of which were novel. The most prevalent pathogenic variants were observed in ABCA4 (14%) and RPE65, CRB1 and CERKL (8% each). 26 variants (8 novel and 18 known) in 19 genes were identified in 26 families (14 missense substitutions, 5 deletions, 4 nonsense pathogenic variants and 3 splice site variants), with further allelic heterogeneity arising from different pathogenic variants in the same gene. The most common phenotype in our cohort is retinitis pigmentosa (23%) and cone rod dystrophy (23%) followed by Leber congenital amaurosis (19.2%). We report the association of new disease phenotypes. This research was carried out in Tunisian patients with IRD in order to delineate the genetic population architecture.

Indexed as

AdolescentAdultATP-Binding Cassette TransportersChildChild, Preschoolcis-trans-IsomerasesCohort StudiesDNA Mutational AnalysisExome SequencingEye ProteinsFemaleGenetic TestingHumansInfantMaleMembrane ProteinsABCA4 protein, humanATP-Binding Cassette Transportersceramide kinasecis-trans-IsomerasesCRB1 protein, humanEye ProteinsMembrane ProteinsNerve Tissue ProteinsPhosphotransferases (Alcohol Group Acceptor)Retinoid Isomerohydrolase

Identifiers

PMID32641690
PMCPMC7343876
OpenAlexW3042028460

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.