ArticleProceedings of the National Academy of Sciences of the United States of America2020
Mismatch-tolerant, alignment-free sequence classification using multiple spaced seeds and multiindex Bloom filters.
Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
8 citing papers in PubMed.
- Genome misassembly detection using Stash: A data structure based on stochastic tile hashing.PloS one · 2026Article
- GoldPolish-target: targeted long-read genome assembly polishing.BMC bioinformatics · 2025Article
- Utilizing Deep Neural Networks to Fill Gaps in Small Genomes.International journal of molecular sciences · 2024Article
- Linear time complexity de novo long read genome assembly with GoldRush.Nature communications · 2023Article
- Comparison of k-mer-basedMicrobiome research reports · 2023Article
- ntHash2: recursive spaced seed hashing for nucleotide sequences.Bioinformatics (Oxford, England) · 2022Article
- To Petabytes and beyond: recent advances in probabilistic and signal processing algorithms and their application to metagenomics.Nucleic acids research · 2020Article
- GapPredict - A Language Model for Resolving Gaps in Draft Genome Assemblies.IEEE/ACM transactions on computational biology and bioinformaticsArticle
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
7 authors.
Funding
Abstract
Alignment-free classification tools have enabled high-throughput processing of sequencing data in many bioinformatics analysis pipelines primarily due to their computational efficiency. Originally
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Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.