Evidence map›Paper›PMID 32641483›Full record

ArticleJournal of virology2020

Sp3 Transcription Factor Cooperates with the Kaposi's Sarcoma-Associated Herpesvirus ORF50 Protein To Synergistically Activate Specific Viral and Cellular Gene Promoters.

Li-Yu Chen, Lee-Wen Chen, Kuo-Ti Peng, Chien-Hui Hung, Pey-Jium Chang, Shie-Shan Wang

Open access · hybridAbstract read
In one paragraph

Article in Journal of virology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Li-Yu ChenGraduate Institute of Clinical Medical Sciences, College of Medicine, Chang-Gung University, Taoyuan, Taiwan.
Lee-Wen ChenDepartment of Respiratory Care, Chang-Gung University of Science and Technology, Chiayi, Taiwan.
Kuo-Ti PengDepartment of Orthopedic Surgery, Chang-Gung Memorial Hospital, Chiayi, Taiwan.
Chien-Hui HungGraduate Institute of Clinical Medical Sciences, College of Medicine, Chang-Gung University, Taoyuan, Taiwan.
Pey-Jium ChangGraduate Institute of Clinical Medical Sciences, College of Medicine, Chang-Gung University, Taoyuan, Taiwan peyjiumc@mail.cgu.edu.tw a483662@yahoo.com.tw.ORCID 0000-0002-6492-0346
Shie-Shan WangDepartment of Pediatric Surgery, Chang-Gung Memorial Hospital, Chiayi, Taiwan peyjiumc@mail.cgu.edu.tw a483662@yahoo.com.tw.
Chang Gung University · TWChang Gung University of Science and Technology · TWChiayi Chang Gung Memorial Hospital · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Kaposi's sarcoma-associated herpesvirus (KSHV)-encoded open reading frame 50 (ORF50) protein is the key transactivator responsible for the latent-to-lytic switch. Here, we investigated the transcriptional activation of the ORF56 gene (encoding a primase protein) by ORF50 and successfully identified an ORF50-responsive element located in the promoter region between positions -97 and -44 (designated 56p-RE). This 56p-RE element contains a noncanonical RBP-Jκ-binding sequence and a nonconsensus Sp1/Sp3-binding sequence. Electrophoretic mobility shift assays revealed that RBP-Jκ, Sp3, and ORF50 could form stable complexes on the 56p-RE element. Importantly, transient-reporter analysis showed that Sp3, but not RBP-Jκ or Sp1, acts in synergy with ORF50 to activate the 56p-RE-containing reporter construct, and the synergy mainly depends on the Sp1/Sp3-binding region of the 56p-RE element. Sequence similarity searches revealed that the promoters for ORF21 (thymidine kinase), ORF60 (ribonucleotide reductase, small subunit), and cellular interleukin-10 (IL-10) contain a sequence motif similar to the Sp1/Sp3-binding region of the 56p-RE element, and we found that these promoters could also be synergistically activated by ORF50 and Sp3 via the conserved motifs. Noteworthily, the conversion of the Sp1/Sp3-binding sequence of the 56p-RE element into a consensus high-affinity Sp-binding sequence completely lost the synergistic response to ORF50 and Sp3. Moreover, transcriptional synergy could not be detected through other ORF50-responsive elements from the viral PAN, K12, ORF57, and K6 promoters. Collectively, the results of our study demonstrate that ORF50 and Sp3 can act in synergy on the transcription of specific gene promoters, and we find a novel conserved

Indexed as

Promoter Regions, GeneticTranscription, GeneticAnimalsBinding SitesCell LineCell Line, TumorClone CellsFibroblastsGene Expression RegulationHEK293 CellsHerpesvirus 8, HumanHost-Pathogen InteractionsHumansImmediate-Early ProteinsImmunoglobulin J Recombination Signal Sequence-Binding ProteinInterleukin-10IL10 protein, humanImmediate-Early ProteinsImmunoglobulin J Recombination Signal Sequence-Binding ProteinInterleukin-10kaposin B protein, Human herpesvirus 8ORF57 protein, human herpesvirus 8RBPJ protein, humanRta protein, Human herpesvirus 8SP1 protein, humanSp1 Transcription FactorSP3 protein, humanSp3 Transcription FactorTrans-ActivatorsViral ProteinsViral Regulatory and Accessory ProteinsIL-10Kaposi’s sarcoma-associated herpesvirusORF21ORF50ORF56ORF60Sp3synergistic activation

Identifiers

PMID32641483
PMCPMC7459565
OpenAlexW3041244399

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.