Evidence map›Paper›PMID 32640237›Full record

ArticleCell reports2020

Single-Cell and Population Transcriptomics Reveal Pan-epithelial Remodeling in Type 2-High Asthma.

Nathan D Jackson, Jamie L Everman, Maurizio Chioccioli, Luigi Feriani, Katherine C Goldfarbmuren, Satria P Sajuthi, Cydney L Rios, Roger Powell, Michael Armstrong, Joe Gomez and 8 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 93 papers.

0numbers the graph read from it
0cells of the map it votes in
93citing papers in PubMed
9.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

93 citing papers in PubMed, 161 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Structural and cellular mechanisms of mucus plugging in the larger airways.Chinese medical journal pulmonary and critical care medicine · 2026
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Asthma endotypes and theratypes.Chinese medical journal pulmonary and critical care medicine · 2026
    Review
  10. Article
  11. Article
  12. Airway epithelial heterogeneity and mucus plugging in asthmatic bronchioles.American journal of respiratory and critical care medicine · 2026
    Article
  13. Article
  14. Multi-omics to study chronic respiratory diseases and viral infections.European respiratory review : an official journal of the European Respiratory Society · 2026
    Review
  15. Review
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article

33 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 3 countries.

Nathan D JacksonCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206, USA.
Jamie L EvermanCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206, USA.
Maurizio ChioccioliDepartment of Physics, University of Cambridge, Cambridge, CB2 3AX, UK.
Luigi FerianiDepartment of Physics, University of Cambridge, Cambridge, CB2 3AX, UK.
Katherine C GoldfarbmurenCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206, USA.
Satria P SajuthiCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206, USA.
Cydney L RiosCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206, USA.
Roger PowellDepartment of Pharmaceutical Sciences, University of Colorado-AMC, Aurora, CO 80045, USA.
Michael ArmstrongDepartment of Pharmaceutical Sciences, University of Colorado-AMC, Aurora, CO 80045, USA.
Joe GomezDepartment of Pharmaceutical Sciences, University of Colorado-AMC, Aurora, CO 80045, USA.
Cole MichelDepartment of Pharmaceutical Sciences, University of Colorado-AMC, Aurora, CO 80045, USA.
Celeste EngDepartment of Medicine, University of California, San Francisco, San Francisco, CA 94143, USA.
Sam S OhDepartment of Medicine, University of California, San Francisco, San Francisco, CA 94143, USA.
Jose Rodriguez-SantanaCentro de Neumologia Pediatrica, San Juan, PR 00917, USA.
Pietro CicutaDepartment of Physics, University of Cambridge, Cambridge, CB2 3AX, UK.
Nichole ReisdorphDepartment of Pharmaceutical Sciences, University of Colorado-AMC, Aurora, CO 80045, USA.
Esteban G BurchardDepartment of Medicine, University of California, San Francisco, San Francisco, CA 94143, USA; Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA 94158, USA.
Max A SeiboldCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206, USA; Department of Pediatrics, National Jewish Health, Denver, CO 80206, USA; Division of Pulmonary Sciences and Critical Care Medicine, Department of Medicine, University of Colorado-AMC, Aurora, CO 80045, USA. Electronic address: seiboldm@njhealth.org.
National Jewish Health · USUniversity of Colorado Denver · USUniversity of California, San Francisco · USUniversity of Cambridge · GBCentro de Neumologia Pediatrica · PR

Funding

Clinical and Translational Science InstituteUL1TR001872 · NCATS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI COLLARD, HAROLD R, JACOBY, VANESSA · 2016 to 2025
$112.1M
Natural History of Viral Induced Airway Dysfunction and Asthma in Minority ChildrenU01HL138626 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI RODRIGUEZ-SANTANA, JOSE, SEIBOLD, MAX A · 2018 to 2022
$10.0M
Transcriptomic and Genetic Endotyping of Exacerbation-Prone AsthmaticsP01HL132821 · NHLBI · NATIONAL JEWISH HEALTH · PI SEIBOLD, MAX A · 2017 to 2021
$9.0M
Transcriptomic and Pharmacogenetic Asthma Endotypes in Minority ChildrenR01HL135156 · NHLBI · NATIONAL JEWISH HEALTH · PI SEIBOLD, MAX A, ZIV, ELAD · 2017 to 2021
$4.1M
Genes, air pollution, and asthma severity in minority childrenR01MD010443 · NIMHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SEIBOLD, MAX A, ZIV, ELAD · 2016 to 2020
$3.8M
Genetic Control of Airway Epithelium Gene Expression in Childhood AsthmaticsR01HL128439 · NHLBI · NATIONAL JEWISH HEALTH · PI SEIBOLD, MAX A · 2015 to 2019
$3.1M
NCATS NIH HHS UL1 TR001872NHLBI NIH HHS P01 HL132821NHLBI NIH HHS R01 HL128439NHLBI NIH HHS R01 HL135156NHLBI NIH HHS U01 HL138626NIMHD NIH HHS R01 MD010443
6 · The paper itself

Abstract

The type 2 cytokine-high asthma endotype (T2H) is characterized by IL-13-driven mucus obstruction of the airways. To further investigate this incompletely understood pathobiology, we characterize IL-13 effects on human airway epithelial cell cultures using single-cell RNA sequencing, finding that IL-13 generates a distinctive transcriptional state for each cell type. Specifically, we discover a mucus secretory program induced by IL-13 in all cell types which converts both mucus and defense secretory cells into a metaplastic state with emergent mucin production and secretion, while leading to ER stress and cell death in ciliated cells. The IL-13-remodeled epithelium secretes a pathologic, mucin-imbalanced, and innate immunity-depleted proteome that arrests mucociliary motion. Signatures of IL-13-induced cellular remodeling are mirrored by transcriptional signatures characteristic of the nasal airway epithelium within T2H versus T2-low asthmatic children. Our results reveal the epithelium-wide scope of T2H asthma and present candidate therapeutic targets for restoring normal epithelial function.

Indexed as

Single-Cell AnalysisAsthmaBiological TransportCellular ReprogrammingChildCiliaDown-RegulationEndoplasmic Reticulum StressEpitheliumHumansImmunity, InnateInterferonsInterleukin-13MetaplasiaMucusTranscriptomeInterferonsInterleukin-13air-liquid interfaceciliary beat frequencydiseaseGALAlungproteomicsRNA-seqsecretomesingle cell sequencingtype 2 inflammation

Identifiers

PMID32640237
PMCPMC8046336
OpenAlexW3041832488

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.