Evidence map›Paper›PMID 32639995›Full record

ArticlePLoS genetics2020

An expanded cell wall damage signaling network is comprised of the transcription factors Rlm1 and Sko1 in Candida albicans.

Marienela Y Heredia, Mélanie A C Ikeh, Deepika Gunasekaran, Karen A Conrad, Sviatlana Filimonava, Dawn H Marotta, Clarissa J Nobile, Jason M Rauceo

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.5field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Review
  3. International journal of molecular sciences · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. The Role of Sfp1 inJournal of fungi (Basel, Switzerland) · 2022
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. International journal of molecular sciences · 2021
    Article
  15. Review
  16. Article
  17. The Roles of Chromatin Accessibility in Regulating theJournal of fungi (Basel, Switzerland) · 2021
    Review
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Marienela Y HerediaDepartment of Sciences, John Jay College of the City University of New York, New York, New York, United States of America.
Mélanie A C IkehDepartment of Molecular and Cell Biology, School of Natural Sciences, University of California Merced, Merced, California, United States of America.
Deepika GunasekaranDepartment of Molecular and Cell Biology, School of Natural Sciences, University of California Merced, Merced, California, United States of America.ORCID 0000-0002-8227-7892
Karen A ConradDepartment of Sciences, John Jay College of the City University of New York, New York, New York, United States of America.ORCID 0000-0002-5749-3972
Sviatlana FilimonavaDepartment of Sciences, John Jay College of the City University of New York, New York, New York, United States of America.ORCID 0000-0003-1488-4081
Dawn H MarottaDepartment of Sciences, John Jay College of the City University of New York, New York, New York, United States of America.ORCID 0000-0003-3596-4646
Clarissa J NobileDepartment of Molecular and Cell Biology, School of Natural Sciences, University of California Merced, Merced, California, United States of America.ORCID 0000-0003-0799-6499
Jason M RauceoDepartment of Sciences, John Jay College of the City University of New York, New York, New York, United States of America.ORCID 0000-0002-3978-7694
City University of New York · USUniversity of California, Merced · US

Funding

Genetic regulation of inter- and intra-species microbial community formationR35GM124594 · NIGMS · UNIVERSITY OF CALIFORNIA, MERCED · PI NOBILE, CLARISSA JANE · 2017 to 2021
$2.0M
Pathogenic Yeast Stress Signaling NetworksSC3GM111133 · NIGMS · JOHN JAY COLLEGE OF CRIMINAL JUSTICE · PI RAUCEO, JASON MALCOLM · 2015 to 2018
$471k
NIGMS NIH HHS R35 GM124594NIGMS NIH HHS SC3 GM111133
6 · The paper itself

Abstract

The human fungal pathogen Candida albicans is constantly exposed to environmental challenges impacting the cell wall. Signaling pathways coordinate stress adaptation and are essential for commensalism and virulence. The transcription factors Sko1, Cas5, and Rlm1 control the response to cell wall stress caused by the antifungal drug caspofungin. Here, we expand the Sko1 and Rlm1 transcriptional circuit and demonstrate that Rlm1 activates Sko1 cell wall stress signaling. Caspofungin-induced transcription of SKO1 and several Sko1-dependent cell wall integrity genes are attenuated in an rlm1Δ/Δ mutant strain when compared to the treated wild-type strain but not in a cas5Δ/Δ mutant strain. Genome-wide chromatin immunoprecipitation (ChIP-seq) results revealed numerous Sko1 and Rlm1 directly bound target genes in the presence of caspofungin that were undetected in previous gene expression studies. Notable targets include genes involved in cell wall integrity, osmolarity, and cellular aggregation, as well as several uncharacterized genes. Interestingly, we found that Rlm1 does not bind to the upstream intergenic region of SKO1 in the presence of caspofungin, indicating that Rlm1 indirectly controls caspofungin-induced SKO1 transcription. In addition, we discovered that caspofungin-induced SKO1 transcription occurs through self-activation. Based on our ChIP-seq data, we also discovered an Rlm1 consensus motif unique to C. albicans. For Sko1, we found a consensus motif similar to the known Sko1 motif for Saccharomyces cerevisiae. Growth assays showed that SKO1 overexpression suppressed caspofungin hypersensitivity in an rlm1Δ/Δ mutant strain. In addition, overexpression of the glycerol phosphatase, RHR2, suppressed caspofungin hypersensitivity specifically in a sko1Δ/Δ mutant strain. Our findings link the Sko1 and Rlm1 signaling pathways, identify new biological roles for Sko1 and Rlm1, and highlight the complex dynamics underlying cell wall signaling.

Indexed as

Antifungal AgentsBasic-Leucine Zipper Transcription FactorsCandida albicansCaspofunginCell WallFungal ProteinsGene Expression Regulation, FungalHumansMADS Domain ProteinsPhosphorylationRepressor ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionTranscription FactorsAntifungal AgentsBasic-Leucine Zipper Transcription FactorsCaspofunginFungal ProteinsMADS Domain ProteinsRepressor ProteinsRLM1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSKO1 protein, S cerevisiaeTranscription Factors

Identifiers

PMID32639995
PMCPMC7371209
OpenAlexW3042104965

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.