ArticleMolecular ecology resources2020
Genome scans for selection and introgression based on k-nearest neighbour techniques.
Article in Molecular ecology resources, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
11 citing papers in PubMed.
- A Multi-Omics, Machine Learning-Aware, Genome-Wide Metabolic Model of Bacillus Subtilis Refines the Gene Expression and Cell Growth Prediction.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024Article
- Rapid and Repeated Climate Adaptation Involving Chromosome Inversions following Invasion of an Insect.Molecular biology and evolution · 2024Article
- A Catalog of Coding Sequence Variations in Salivary Proteins' Genes Occurring during Recent Human Evolution.International journal of molecular sciences · 2023Article
- A new hybrid algorithm for three-stage gene selection based on whale optimization.Scientific reports · 2023Article
- A novel hybrid algorithm based on Harris Hawks for tumor feature gene selection.PeerJ. Computer science · 2023Article
- Ghost lineages can invalidate or even reverse findings regarding gene flow.PLoS biology · 2022Article
- Finding the adaptive needles in a population-structured haystack: A case study in a New Zealand mollusc.The Journal of animal ecology · 2022Article
- Demography and selection analysis of the incipient adaptive radiation of a Hawaiian woody species.PLoS genetics · 2022Article
- Rapid genetic adaptation to recently colonized environments is driven by genes underlying life history traits.BMC genomics · 2021Article
- Incipient resistance to an effective pesticide results from genetic adaptation and the canalization of gene expression.Evolutionary applications · 2021Article
- Genome scans for selection and introgression based on k-nearest neighbour techniques.Molecular ecology resources · 2020Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
4 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
In recent years, genome-scan methods have been extensively used to detect local signatures of selection and introgression. Most of these methods are either designed for one or the other case, which may impair the study of combined cases. Here, we introduce a series of versatile genome-scan methods applicable for both cases, the detection of selection and introgression. The proposed approaches are based on nonparametric k-nearest neighbour (kNN) techniques, while incorporating pairwise Fixation Index (F
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.