Evidence map›Paper›PMID 32638316›Full record

ArticleMolecular biology reports2020

Detection of HBB:c.92+5G>C and HBB:c.108delC mutations in β-thalassemia carriers using high-resolution melting analysis.

Nurdiyah Ika Hidayati, Nastiti Wijayanti, Niken Satuti Nur Handayani

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular biology reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Nurdiyah Ika HidayatiLaboratory of Animal Physiology, Faculty of Biology, Universitas Gadjah Mada, Yogyakarta, 55281, Indonesia.
Nastiti WijayantiLaboratory of Animal Physiology, Faculty of Biology, Universitas Gadjah Mada, Yogyakarta, 55281, Indonesia.
Niken Satuti Nur HandayaniLaboratory of Genetics and Breeding, Faculty of Biology, Universitas Gadjah Mada, Yogyakarta, 55281, Indonesia. niken_satuti@ugm.ac.id.ORCID http://orcid.org/0000-0001-9484-4316
Universitas Gadjah Mada · ID

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The HBB:c.92+5G>C [known as IVSI-5 (GC)] and HBB:c.108delC [known as Cd 35 (del C)] are the β-globin gene mutations that commonly found in Indonesia. Detection of the mutation in the β-thalassemia carriers can be useful to prevent an increase in the number of β-thalassemia patients. High-Resolution Melting Analysis (HRMA) is the method that can detect the mutation rapidly. The aim of this study was to detect HBB:c.92+5G>C and HBB:c.108delC mutations of the β-thalassemia carriers using HRMA. DNA was isolated from blood archive of ten hematologically proved β-thalassemia carriers. Detection of mutations was carried out by HRMA and then confirmed by sequencing. HRMA was performed by using two pairs of specific primers. One pair of primer targeted the region of HBB:c.92+5G>C and the other targeted the region of HBB:c.108delC. The results of detection of mutation using HRMA then were confirmed by sequencing. A specific primer pair covering the region of HBB:c.92+5G>C to HBB:c.108delC were used for sequencing. The results of HRMA showed that the HBB:c.92+5G>C and HBB:c.108delC mutations found in 50% and 30% samples, respectively. The HRMA results can be confirmed by sequencing in all samples. It can be concluded that HRMA can be used to detect HBB:c.92+5G>C heterozygote and HBB:c.108delC heterozygote mutations.

Indexed as

Adultbeta-Globinsbeta-ThalassemiaDNAGenotypeHeterozygoteHumansIndonesiaMutationPolymerase Chain Reactionbeta-GlobinsDNAHBB:c.108delC mutationHBB:c.92+5G>C mutationHigh-resolution melting analysisMutation detectionβ-thalassemia

Identifiers

PMID32638316
OpenAlexW3041851127

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.