Evidence map›Paper›PMID 32638088›Full record

ArticleMikrochimica acta2020

Label-free and self-assembled fluorescent DNA nanopompom for determination of miRNA-21.

Nandi Chen, Junyu Li, Xianzhen Feng, Yanping Yang, Li Zhu, Xiaomeng Chen, Xuan Liu, Yang Li, Cunchuan Wang, Ligang Xia

Abstract read
PubMed Publisher
In one paragraph

Article in Mikrochimica acta, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Nandi ChenDepartment of Gastrointestinal Surgery, The Second Clinical Medicine College (Shenzhen People's Hospital) of Jinan University, Shenzhen, 518020, Guangdong, China.
Junyu LiDepartment of Gastrointestinal Surgery, The Second Clinical Medicine College (Shenzhen People's Hospital) of Jinan University, Shenzhen, 518020, Guangdong, China.
Xianzhen FengDepartment of Gastrointestinal Surgery, The Second Clinical Medicine College (Shenzhen People's Hospital) of Jinan University, Shenzhen, 518020, Guangdong, China.
Yanping YangMolecular Imaging Innovations Institute (MI3), Department of Radiology, Weill Cornell Medicine, 413 East 69th Street, New York, NY, 10065, USA.
Li ZhuDepartment of Gastrointestinal Surgery, The Second Clinical Medicine College (Shenzhen People's Hospital) of Jinan University, Shenzhen, 518020, Guangdong, China.
Xiaomeng ChenDepartment of Gastrointestinal Surgery, The Second Clinical Medicine College (Shenzhen People's Hospital) of Jinan University, Shenzhen, 518020, Guangdong, China.
Xuan LiuDepartment of Gastrointestinal Surgery, The Second Clinical Medicine College (Shenzhen People's Hospital) of Jinan University, Shenzhen, 518020, Guangdong, China.
Yang LiDepartment of Gastrointestinal Surgery, The Second Clinical Medicine College (Shenzhen People's Hospital) of Jinan University, Shenzhen, 518020, Guangdong, China.
Cunchuan WangDepartment of General Surgery, the First Affiliated Hospital of Jinan University, No. 613 Huangpu Road, West, Guangzhou, People's Republic of China. twcc@jnu.edu.cn.
Ligang XiaDepartment of Gastrointestinal Surgery, The Second Clinical Medicine College (Shenzhen People's Hospital) of Jinan University, Shenzhen, 518020, Guangdong, China. ligangxiaszph@hotmail.com.
Jinan University · CNCornell University · USFirst Affiliated Hospital of Jinan University · CN

Funding

Development and Reform Commission of Shenzhen Municipality JCYJ20190807145011340Guangdong Basic and Applied Basic Research Foundation 2019A1515110402National Natural Science Foundation of China 81971637
6 · The paper itself

Abstract

A label-free fluorescence method based on self-assembled DNA nanopompom has been developed for miRNA-21 detection. In the presence of miRNA-21, three DNA hairpin probes with split G-quadruplex assemble the DNA nanopompom. Based on the isothermal toehold-mediated DNA strand displacement reaction, the target miRNA can be catalytically recycled and trigger three DNA hairpin probes to self-assemble the DNA nanopompom and release the G-quadruplex. The formation of the G-quadruplex increases the fluorescence emission intensity of thioflavin. For thioflavin-based miRNA-21 detection, the excitation and emission wavelengths are set to 425 nm and 490 nm, respectively. The limit of detection for miRNA-21 is 0.8 pM according to F/F0 = 0.0031 × C

Indexed as

BenzothiazolesCell Line, TumorDNADNA ProbesFluorescent DyesG-QuadruplexesHumansLimit of DetectionMicroRNAsNanostructuresNucleic Acid HybridizationSensitivity and SpecificitySpectrometry, FluorescenceBenzothiazolesDNADNA ProbesFluorescent DyesMicroRNAsMIRN21 microRNA, humanthioflavin TDNA nanotechnologyG-quadruplexLabel-free detectionmiRNASelf-assemble

Identifiers

PMID32638088
OpenAlexW3041257337

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.