Evidence map›Paper›PMID 32637106›Full record

ArticleSAGE open medicine2020

Characterization of envelope sequence of HIV virus in children infected with HIV in Vietnam.

Linh Vu Phuong Dang, Hung Viet Pham, Thanh Thi Dinh, Thu Hoai Nguyen, Quyen Thi Huyen Vu, Nhung Thi Phuong Vu, Phuong Thi Bich Le, Lam Van Nguyen, Hai Thanh Le, Phuong Thi Vu and 1 more

Open access · goldAbstract read
In one paragraph

Article in SAGE open medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Observational
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Linh Vu Phuong DangHanoi University of Public Health, Hanoi, Vietnam.ORCID https://orcid.org/0000-0001-6886-2713
Hung Viet PhamVietnam National Children's Hospital, Hanoi, Vietnam.
Thanh Thi DinhHanoi University of Public Health, Hanoi, Vietnam.
Thu Hoai NguyenNinh Binh Maternity Hospital, Hanoi, Vietnam.
Quyen Thi Huyen VuNinh Binh Maternity Hospital, Hanoi, Vietnam.
Nhung Thi Phuong VuHanoi University of Public Health, Hanoi, Vietnam.
Phuong Thi Bich LeHanoi University of Public Health, Hanoi, Vietnam.
Lam Van NguyenNinh Binh Maternity Hospital, Hanoi, Vietnam.
Hai Thanh LeNinh Binh Maternity Hospital, Hanoi, Vietnam.
Phuong Thi VuDinh Tien Hoang Institute of Medicine, Hanoi, Vietnam.
Linus OlsonTraining and Research Academic Collaboration (TRAC) - Sweden - Vietnam.
Vietnam National Children's Hospital · VNHanoi University · VNMinistry of Education and Training · VN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHIV is characterized by high levels of genetic variability, including increased numbers of heterogeneous sequences of the envelope region. Therefore, studying genetic variability of HIV in relation to viral replication might facilitate prognosis of disease progression.

methodsThe study was designed as cross-sectional; data and samples of participants collected and analyzed

resultsSubstantial mutations in the C2 region were found in patients with high levels of viral replication while changes in the C3 region were mostly found in patients with low viral load. In the V1 region, we found profound amino acid modifications in patients with low HIV viral loads in contrast to the V2 sequence, where we identified single point mutations in patients with increased HIV viral load. The V3 region was relatively homogeneous, while profound deletions in the V4 region were detected in patients with increased viral replication.

conclusionOur results suggest that genetic variations in different regions of the HIV envelope sequence, including both conserved C2 and C3 and variable V1/V2 and V4 regions, might be involved in increased viral infectivity and replication capacity. Such knowledge might help improve prediction of HIV progress and treatment in patients.

Indexed as

CD4 T cell countschildrenenvelopeHIVHIV viral loadVietnam

Identifiers

PMID32637106
PMCPMC7323269
OpenAlexW3037698281

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.