Evidence map›Paper›PMID 32636384›Full record

ArticleNature communications2020

Structure of the yeast Swi/Snf complex in a nucleosome free state.

Chengcheng Wang, Zhouyan Guo, Xiechao Zhan, Fenghua Yang, Mingxuan Wu, Xiaofeng Zhang

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Chengcheng Wang *Key Laboratory of Structural Biology of Zhejiang Province, Institute of Biology, Westlake Institute for Advanced Study, 18 Shilongshan Road, 310024, Hangzhou, Zhejiang Province, China. wangchengcheng@westlake.edu.cn.ORCID http://orcid.org/0000-0002-1467-9267
Zhouyan Guo *Key Laboratory of Structural Biology of Zhejiang Province, Institute of Biology, Westlake Institute for Advanced Study, 18 Shilongshan Road, 310024, Hangzhou, Zhejiang Province, China.ORCID http://orcid.org/0000-0002-7232-6152
Xiechao Zhan *Beijing Advanced Innovation Center for Structural Biology, Tsinghua-Peking Joint Center for Life Sciences, School of Life Sciences, Tsinghua University, 100084, Beijing, China.ORCID http://orcid.org/0000-0001-5198-6461
Fenghua YangKey Laboratory of Structural Biology of Zhejiang Province, Institute of Biology, Westlake Institute for Advanced Study, 18 Shilongshan Road, 310024, Hangzhou, Zhejiang Province, China.
Mingxuan WuSchool of Science, Westlake University, 18 Shilongshan Road, 310024, Hangzhou, Zhejiang Province, China.
Xiaofeng ZhangKey Laboratory of Structural Biology of Zhejiang Province, Institute of Biology, Westlake Institute for Advanced Study, 18 Shilongshan Road, 310024, Hangzhou, Zhejiang Province, China. zhangxiaofeng@westlake.edu.cn.ORCID http://orcid.org/0000-0002-9658-5917
Westlake University · CNCenter for Life Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SWI/SNF remodelers play a key role in regulating chromatin architecture and gene expression. Here, we report the cryo-EM structure of the Saccharomyces cerevisiae Swi/Snf complex in a nucleosome-free state. The structure consists of a stable triangular base module and a flexible Arp module. The conserved subunits Swi1 and Swi3 form the backbone of the complex and closely interact with other components. Snf6, which is specific for yeast Swi/Snf complex, stabilizes the binding of the ATPase-containing subunit Snf2 to the base module. Comparison of the yeast Swi/Snf and RSC complexes reveals conserved structural features that govern the assembly and function of these two subfamilies of chromatin remodelers. Our findings complement those from recent structures of the yeast and human chromatin remodelers and provide further insights into the assembly and function of the SWI/SNF remodelers.

Indexed as

Adenosine TriphosphatasesChromatinChromosomal Proteins, Non-HistoneCryoelectron MicroscopyDNA-Binding ProteinsHumansNuclear ProteinsNucleosomesProtein BindingProtein DomainsRepressor ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscription FactorsAdenosine TriphosphatasesBANF1 protein, humanChromatinChromosomal Proteins, Non-HistoneDNA-Binding ProteinsNuclear ProteinsNucleosomesRepressor ProteinsRIM101 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSNF2 protein, S cerevisiaeSWI1 protein, S cerevisiaeSWI3 protein, S cerevisiaeTranscription Factors

Identifiers

PMID32636384
PMCPMC7340788
OpenAlexW3039567736

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.