Evidence map›Paper›PMID 32636369›Full record

ArticleNature communications2020

Pathogenic ARH3 mutations result in ADP-ribose chromatin scars during DNA strand break repair.

Hana Hanzlikova, Evgeniia Prokhorova, Katerina Krejcikova, Zuzana Cihlarova, Ilona Kalasova, Jan Kubovciak, Jana Sachova, Richard Hailstone, Jan Brazina, Shereen Ghosh and 4 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.9field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 42 citations in OpenAlex.

  1. Review
  2. NovelNeurology. Genetics · 2026
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  13. Deregulated DNA ADP-ribosylation impairs telomere replication.Nature structural & molecular biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 4 countries.

Hana HanzlikovaDepartment of Genome Dynamics, Institute of Molecular Genetics of the Czech Academy of Sciences, Prague 4, 142 20, Czech Republic. hana.hanzlikova@img.cas.cz.ORCID http://orcid.org/0000-0001-7235-7269
Evgeniia ProkhorovaSir William Dunn School of Pathology, University of Oxford, Oxford, OX1 3RE, UK.ORCID http://orcid.org/0000-0002-5467-5586
Katerina KrejcikovaDepartment of Genome Dynamics, Institute of Molecular Genetics of the Czech Academy of Sciences, Prague 4, 142 20, Czech Republic.ORCID http://orcid.org/0000-0003-3622-042X
Zuzana CihlarovaDepartment of Genome Dynamics, Institute of Molecular Genetics of the Czech Academy of Sciences, Prague 4, 142 20, Czech Republic.
Ilona KalasovaDepartment of Genome Dynamics, Institute of Molecular Genetics of the Czech Academy of Sciences, Prague 4, 142 20, Czech Republic.ORCID http://orcid.org/0000-0001-8235-1805
Jan KubovciakDepartment of Genomics and Bioinformatics, Institute of Molecular Genetics of the Czech Academy of Sciences, Prague 4, 142 20, Czech Republic.
Jana SachovaDepartment of Genomics and Bioinformatics, Institute of Molecular Genetics of the Czech Academy of Sciences, Prague 4, 142 20, Czech Republic.ORCID http://orcid.org/0000-0003-1176-6127
Richard HailstoneGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Falmer, Brighton, BN1 9RQ, UK.
Jan BrazinaGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Falmer, Brighton, BN1 9RQ, UK.
Shereen GhoshLaboratory for Pediatric Brain Disease, Howard Hughes Medical Institute, University of California, San Diego, La Jolla, CA, 92093, USA.
Sebahattin CirakCenter for Molecular Medicine Cologne, University of Cologne, Cologne, 50931, Germany.
Joseph G GleesonLaboratory for Pediatric Brain Disease, Howard Hughes Medical Institute, University of California, San Diego, La Jolla, CA, 92093, USA.ORCID http://orcid.org/0000-0002-0889-9220
Ivan AhelSir William Dunn School of Pathology, University of Oxford, Oxford, OX1 3RE, UK.
Keith W CaldecottDepartment of Genome Dynamics, Institute of Molecular Genetics of the Czech Academy of Sciences, Prague 4, 142 20, Czech Republic. k.w.caldecott@sussex.ac.uk.ORCID http://orcid.org/0000-0003-4255-9016
Czech Academy of Sciences, Institute of Molecular Genetics · CZUniversity of Sussex · GBChildren’s Institute · USUniversity of Oxford · GBUniversity of Cologne · DE

Funding

Training Program in Basic Clinical GeneticsT32GM008666 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMILTON, BRUCE A · 1998 to 2021
$8.6M
UC San Diego Genetics Training ProgramT32GM145427 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BRUCE A HAMILTON · 2022 to 2026
$2.6M
Cancer Research UK 22284Cancer Research UK C35050/A22284Medical Research Council MR/P010121/1NIGMS NIH HHS T32 GM008666NIGMS NIH HHS T32 GM145427Wellcome Trust 101794Wellcome Trust 210634Wellcome Trust 210634/Z/18/Z
6 · The paper itself

Abstract

Neurodegeneration is a common hallmark of individuals with hereditary defects in DNA single-strand break repair; a process regulated by poly(ADP-ribose) metabolism. Recently, mutations in the ARH3 (ADPRHL2) hydrolase that removes ADP-ribose from proteins have been associated with neurodegenerative disease. Here, we show that ARH3-mutated patient cells accumulate mono(ADP-ribose) scars on core histones that are a molecular memory of recently repaired DNA single-strand breaks. We demonstrate that the ADP-ribose chromatin scars result in reduced endogenous levels of important chromatin modifications such as H3K9 acetylation, and that ARH3 patient cells exhibit measurable levels of deregulated transcription. Moreover, we show that the mono(ADP-ribose) scars are lost from the chromatin of ARH3-defective cells in the prolonged presence of PARP inhibition, and concomitantly that chromatin acetylation is restored to normal. Collectively, these data indicate that ARH3 can act as an eraser of ADP-ribose chromatin scars at sites of PARP activity during DNA single-strand break repair.

Indexed as

DNA Breaks, Single-StrandedDNA RepairMutationAdenosine Diphosphate RiboseCell Line, TumorCell SurvivalChromatinFibroblastsGene Expression RegulationGene Knockout TechniquesGlycoside HydrolasesHEK293 CellsHistonesHumansNeurodegenerative DiseasesX-ray Repair Cross Complementing Protein 1Adenosine Diphosphate RiboseADPRS protein, humanChromatinGlycoside HydrolasesHistonesX-ray Repair Cross Complementing Protein 1XRCC1 protein, human

Identifiers

PMID32636369
PMCPMC7341855
OpenAlexW3039458460

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.