Evidence map›Paper›PMID 32634163›Full record

ArticlePloS one2020

Diverse patterns of antibody variable gene repertoire disruption in patients with amyloid light chain (AL) amyloidosis.

Elaine C Chen, Samuel Rubinstein, Cinque Soto, Robin G Bombardi, Samuel B Day, Luke Myers, Alexey Zaytsev, Mahsa Majedi, R Frank Cornell, James E Crowe

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 4 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Elaine C ChenDepartment of Pathology Microbiology, and Immunology, Vanderbilt University Medical Center, Nashville, TN, United States of America.
Samuel RubinsteinDivision of Hematology and Oncology, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN, United States of America.ORCID 0000-0003-3065-9220
Cinque SotoThe Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN, United States of America.
Robin G BombardiThe Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN, United States of America.
Samuel B DayThe Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN, United States of America.
Luke MyersThe Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN, United States of America.ORCID 0000-0003-1132-2550
Alexey ZaytsevThe Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN, United States of America.ORCID 0000-0003-1244-9211
Mahsa MajediThe Vanderbilt Vaccine Center, Vanderbilt University Medical Center, Nashville, TN, United States of America.
R Frank CornellDivision of Hematology and Oncology, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN, United States of America.
James E CroweDepartment of Pathology Microbiology, and Immunology, Vanderbilt University Medical Center, Nashville, TN, United States of America.ORCID 0000-0002-0049-1079
Vanderbilt University Medical Center · US

Funding

VANDERBILT UNIVERSITY CTSA FOR PEDIATRIC RESEARCHUL1RR024975 · NCRR · VANDERBILT UNIVERSITY · PI BERNARD, GORDON RAPHAEL · 2007 to 2011
$45.7M
The Vanderbilt Institute for Clinical and Translational Research (VICTR)UL1TR000445 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BERNARD, GORDON RAPHAEL · 2012 to 2016
$41.4M
Immunological Mechanisms of Disease Training ProgramT32AI138932 · NIAID · VANDERBILT UNIVERSITY · PI MAJOR, AMY S, RATHMELL, JEFFREY C. · 2019 to 2023
$1.4M
NCATS NIH HHS UL1 TR000445NCRR NIH HHS UL1 RR024975NIAID NIH HHS T32 AI138932
6 · The paper itself

Abstract

Immunoglobulin light chain amyloidosis is the most common form of systemic amyloidosis. AL amyloidosis is caused by a misfolded light chain produced by a clonal population of plasma cells. Disease status currently is defined by measuring the absolute quantity of serum free light chain protein, but this measurement often fails to identify the subclinical presence of clonal cells that may merit additional therapy. Next generation sequencing has the sensitivity to measure the relative amount of dominating light chains within the repertoire of a patient, and this technique is in clinical use to identify clonal populations of plasma cells for multiple myeloma, a related disorder. In this proof-of-concept study, we used bone marrow aspirates of AL amyloidosis positive patients and used reverse transcription of the antibody transcriptome followed by next generation sequencing to identify antibody variable-diversity-joining gene sequences for patients with immunoglobulin light chain amyloidosis, and demonstrate that this technology can be used to identify the dominant clone. The data also reveal differing patterns of overall antibody repertoire disruption in different patients. This method merits further study in larger prospective studies to establish its utility in detecting residual disease for patients with immunoglobulin light chain amyloidosis.

Indexed as

Genes, ImmunoglobulinBone Marrow CellsHigh-Throughput Nucleotide SequencingHumansImmunoglobulin Light-chain AmyloidosisImmunoglobulin Variable RegionReverse TranscriptionSequence Analysis, RNAImmunoglobulin Variable Region

Identifiers

PMID32634163
PMCPMC7340310
OpenAlexW3040793880

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.