Evidence map›Paper›PMID 32633890›Full record

ArticleCancer medicine2020

Cell-free DNA profiling in retinoblastoma patients with advanced intraocular disease: An MSKCC experience.

Prachi Kothari, Francesco Marass, Julie L Yang, Caitlin M Stewart, Dennis Stephens, Juber Patel, Maysun Hasan, Xiaohong Jing, Fanli Meng, Jeanette Enriquez and 8 more

Open access · goldAbstract read
In one paragraph

Article in Cancer medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 54 citations in OpenAlex.

  1. Trial
  2. Digital PCR Quantification of a CirculatingInternational journal of molecular sciences · 2026
    Article
  3. Blood-Based Cell-Free DNA in Ophthalmic Oncology.Translational vision science & technology · 2025
    Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. High-Sensitivity Mutation Analysis of Cell-Free DNA for Disease Monitoring in Endometrial Cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Damage-Associated Molecular Patterns (DAMPs) in Retinal Disorders.International journal of molecular sciences · 2022
    Review
  16. Review
  17. Review
  18. Article
  19. Ophthalmology science · 2021
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 2 institutions in 2 countries.

Prachi KothariMemorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0002-3137-844X
Francesco MarassETH Zurich, Basel, Switzerland.ORCID 0000-0002-8993-7320
Julie L YangMemorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0003-4747-6391
Caitlin M StewartMemorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0002-5070-4810
Dennis StephensMemorial Sloan Kettering Cancer Center, New York, NY, USA.
Juber PatelMemorial Sloan Kettering Cancer Center, New York, NY, USA.
Maysun HasanMemorial Sloan Kettering Cancer Center, New York, NY, USA.
Xiaohong JingMemorial Sloan Kettering Cancer Center, New York, NY, USA.
Fanli MengMemorial Sloan Kettering Cancer Center, New York, NY, USA.
Jeanette EnriquezMemorial Sloan Kettering Cancer Center, New York, NY, USA.
Kety HubermanMemorial Sloan Kettering Cancer Center, New York, NY, USA.
Agnes VialeMemorial Sloan Kettering Cancer Center, New York, NY, USA.
Jasmine H FrancisMemorial Sloan Kettering Cancer Center, New York, NY, USA.
Michael F BergerMemorial Sloan Kettering Cancer Center, New York, NY, USA.
Neerav ShuklaMemorial Sloan Kettering Cancer Center, New York, NY, USA.
David H AbramsonMemorial Sloan Kettering Cancer Center, New York, NY, USA.
Ira J DunkelMemorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0001-8091-6067
Dana W Y TsuiMemorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0002-0595-6664
Memorial Sloan Kettering Cancer Center · USSIB Swiss Institute of Bioinformatics · CH

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
NCI NIH HHS P30 CA008748
6 · The paper itself

Abstract

purposeThe enucleation rate for retinoblastoma has dropped from over 95% to under 10% in the past 10 years as a result of improvements in therapy. This reduces access to tumor tissue for molecular profiling, especially in unilateral retinoblastoma, and hinders the confirmation of somatic RB1 mutations necessary for genetic counseling. Plasma cell-free DNA (cfDNA) has provided a platform for noninvasive molecular profiling in cancer, but its applicability in low tumor burden retinoblastoma has not been shown. We analyzed cfDNA collected from 10 patients with available tumor tissue to determine whether sufficient tumorderived cfDNA is shed in plasma from retinoblastoma tumors to enable noninvasive RB1 mutation detection.

methodsTumor tissue was collected from eye enucleations in 10 patients diagnosed with advanced intra-ocular unilateral retinoblastoma, three of which went on to develop metastatic disease. Tumor RB1 mutation status was determined using an FDA-cleared tumor sequencing assay, MSK-IMPACT. Plasma samples were collected before eye enucleation and analyzed with a customized panel targeting all exons of RB1.

resultsTumor-guided genotyping detected 10 of the 13 expected somatic RB1 mutations in plasma cfDNA in 8 of 10 patients (average variant allele frequency 3.78%). Without referring to RB1 status in the tumor, de novo mutation calling identified 7 of the 13 expected RB1 mutations (in 6 of 10 patients) with high confidence.

conclusionPlasma cfDNA can detect somatic RB1 mutations in patients with unilateral retinoblastoma. Since intraocular biopsies are avoided in these patients because of concern about spreading tumor, cfDNA can potentially offer a noninvasive platform to guide clinical decisions about treatment, follow-up schemes, and risk of metastasis.

Indexed as

Cancer Care FacilitiesChild, PreschoolCirculating Tumor DNADNA Mutational AnalysisExonsEye EnucleationFeasibility StudiesGenes, RetinoblastomaGenotyping TechniquesHumansInfantInfant, NewbornNew York CityRetinal NeoplasmsRetinoblastomaCirculating Tumor DNAliquid biopsymolecular profiling in retinoblastomaplasma cell-free DNARB1 mutationretinoblastoma

Identifiers

PMID32633890
PMCPMC7476838
OpenAlexW3041722505

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.