Evidence map›Paper›PMID 32632235›Full record

ArticleScientific reports2020

Genome-wide identification, and characterization of the CDPK gene family reveal their involvement in abiotic stress response in Fragaria x ananassa.

Rosane Lopes Crizel, Ellen Cristina Perin, Isabel Lopes Vighi, Rafael Woloski, Amilton Seixas, Luciano da Silva Pinto, César Valmor Rombaldi, Vanessa Galli

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
13.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 77 citations in OpenAlex.

  1. Review
  2. Article
  3. Salinity Stress in Strawberry (Plants (Basel, Switzerland) · 2026
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  6. Plants (Basel, Switzerland) · 2025
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  7. FvWRKY75 Positively RegulatesPlants (Basel, Switzerland) · 2025
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  10. Review
  11. Genome-wide identification ofFrontiers in plant science · 2025
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  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Identification ofPeerJ · 2023
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Rosane Lopes CrizelDepartamento de Ciência e Tecnologia Agroindustrial, Universidade Federal de Pelotas, Pelotas, Brasil.
Ellen Cristina PerinPrograma de Pós-Graduação em Tecnologia de Processos Químicos e Bioquímicos, Universidade Tecnologia Federal do Paraná, Pato Branco, Brasil.
Isabel Lopes VighiCentro de Desenvolvimento Tecnológico, Universidade Federal de Pelotas, Pelotas, Brasil.
Rafael WoloskiCentro de Desenvolvimento Tecnológico, Universidade Federal de Pelotas, Pelotas, Brasil.
Amilton SeixasCentro de Desenvolvimento Tecnológico, Universidade Federal de Pelotas, Pelotas, Brasil.
Luciano da Silva PintoCentro de Desenvolvimento Tecnológico, Universidade Federal de Pelotas, Pelotas, Brasil.
César Valmor RombaldiDepartamento de Ciência e Tecnologia Agroindustrial, Universidade Federal de Pelotas, Pelotas, Brasil.
Vanessa GalliDepartamento de Ciência e Tecnologia Agroindustrial, Universidade Federal de Pelotas, Pelotas, Brasil. vane.galli@yahoo.com.br.
Universidade Federal de Pelotas · BRUniversidade Tecnológica Federal do Paraná · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Calcium-dependent protein kinases (CDPKs) are encoded by a large gene family and play important roles against biotic and abiotic stresses and in plant growth and development. To date, little is known about the CDPK genes in strawberry (Fragaria x ananassa). In this study, analysis of Fragaria x ananassa CDPK gene family was performed, including gene structures, phylogeny, interactome and expression profiles. Nine new CDPK genes in Fragaria x ananassa were identified based on RNA-seq data. These identified strawberry FaCDPK genes were classified into four main groups, based on the phylogenetic analysis and structural features. FaCDPK genes were differentially expressed during fruit development and ripening, as well as in response to abiotic stress (salt and drought), and hormone (abscisic acid) treatment. In addition, the interaction network analysis pointed out proteins involved in the ABA-dependent response to plant stress via Ca

Indexed as

Abscisic AcidCalcium-Calmodulin-Dependent Protein KinasesCalcium SignalingChromosome MappingChromosomes, PlantFragariaGene Expression Regulation, DevelopmentalGene Expression Regulation, EnzymologicGene Expression Regulation, PlantGenome, PlantMultigene FamilyPhylogenyPlant ProteinsProtein Interaction MapsProtein KinasesRNA-SeqAbscisic AcidCalcium-Calmodulin-Dependent Protein KinasesPlant ProteinsProtein Kinases

Identifiers

PMID32632235
PMCPMC7338424
OpenAlexW3040136646

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.